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Merge pull request #1080 from drieslab/suite_dev #236

Merge pull request #1080 from drieslab/suite_dev

Merge pull request #1080 from drieslab/suite_dev #236

Triggered via push December 9, 2024 08:15
Status Failure
Total duration 18m 12s
Artifacts 3

main_check.yaml

on: push
Matrix: R-CMD-check
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29 errors and 20 warnings
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
macOS-latest (release)
packages 'smfishHmrf', 'graphcoloring' are not yet installed
macOS-latest (release)
R CMD check found ERRORs
macOS-latest (release)
package 'limma' is not yet installed
macOS-latest (release)
Test failures
macOS-latest (release)
Process completed with exit code 1.
macOS-latest (release)
package 'limma' is not yet installed
macOS-latest (release)
Test failures
macOS-latest (release)
No such keg: /opt/homebrew/Cellar/[email protected]
macOS-latest (release)
package 'limma' is not yet installed
macOS-latest (release)
Test failures
windows-latest (release)
packages 'smfishHmrf', 'graphcoloring' are not yet installed
windows-latest (release)
R CMD check found ERRORs
windows-latest (release)
package 'limma' is not yet installed
windows-latest (release)
Test failures
windows-latest (release)
Process completed with exit code 1.
windows-latest (release)
package 'limma' is not yet installed
windows-latest (release)
Test failures
windows-latest (release)
package 'limma' is not yet installed
windows-latest (release)
Test failures
ubuntu-latest (release)
packages 'smfishHmrf', 'graphcoloring' are not yet installed
ubuntu-latest (release)
R CMD check found ERRORs
ubuntu-latest (release)
package 'limma' is not yet installed
ubuntu-latest (release)
Test failures
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (release)
package 'limma' is not yet installed
ubuntu-latest (release)
Test failures
ubuntu-latest (release)
package 'limma' is not yet installed
ubuntu-latest (release)
Test failures
macOS-latest (release)
Dependence on R version ‘4.4.1’ not with patchlevel 0
macOS-latest (release)
'::' or ':::' imports not declared from:
macOS-latest (release)
Packages unavailable to check Rd xrefs: ‘limma’, ‘ClusterR’, ‘ComplexHeatmap’, ‘clustree’, ‘multinet’, ‘MAST’, ‘scran’, ‘jackstraw’, ‘rhdf5’, ‘harmony’, ‘RcppML’, ‘FactoMineR’, ‘Rtsne’
macOS-latest (release)
Undocumented S4 methods:
macOS-latest (release)
Undocumented arguments in Rd file 'createGiottoVisiumHDObject.Rd'
macOS-latest (release)
'::' or ':::' imports not declared from:
macOS-latest (release)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (release)
Dependence on R version '4.4.1' not with patchlevel 0
windows-latest (release)
'::' or ':::' imports not declared from:
windows-latest (release)
Packages unavailable to check Rd xrefs: 'limma', 'ClusterR', 'ComplexHeatmap', 'clustree', 'multinet', 'MAST', 'scran', 'jackstraw', 'rhdf5', 'harmony', 'RcppML', 'FactoMineR', 'Rtsne'
windows-latest (release)
Undocumented S4 methods:
windows-latest (release)
Undocumented arguments in Rd file 'createGiottoVisiumHDObject.Rd'
windows-latest (release)
'::' or ':::' imports not declared from:
ubuntu-latest (release)
Dependence on R version ‘4.4.1’ not with patchlevel 0
ubuntu-latest (release)
'::' or ':::' imports not declared from:
ubuntu-latest (release)
Packages unavailable to check Rd xrefs: ‘limma’, ‘ClusterR’, ‘ComplexHeatmap’, ‘clustree’, ‘multinet’, ‘MAST’, ‘scran’, ‘jackstraw’, ‘rhdf5’, ‘harmony’, ‘RcppML’, ‘FactoMineR’, ‘Rtsne’
ubuntu-latest (release)
Undocumented S4 methods:
ubuntu-latest (release)
Undocumented arguments in Rd file 'createGiottoVisiumHDObject.Rd'
ubuntu-latest (release)
'::' or ':::' imports not declared from:

Artifacts

Produced during runtime
Name Size
Linux-X64-rrelease-2-results
147 MB
Windows-X64-rrelease-1-results
131 MB
macOS-ARM64-rrelease-0-results
147 MB