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GiottoVisuals 0.2.6#87

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jiajic merged 57 commits intomaindrieslab/GiottoVisuals:mainfrom devdrieslab/GiottoVisuals:devCopy head branch name to clipboardOct 27, 2024

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Commits on Jun 12, 2024

• update bioc version for bioc github check

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Commits on Jul 11, 2024

• Merge branch 'drieslab:dev' into dev

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• Update roxygen version

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Commits on Jul 30, 2024

• Merge branch 'dev' of https://github.com/josschavezf/GiottoVisuals into dev

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Commits on Jul 31, 2024

• chore: update docs

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Commits on Aug 15, 2024

• refactor: save option setting

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• chore: move code around

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• refactor: plot_output_handler

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Commits on Aug 16, 2024

• Merge branch 'dev' of https://github.com/josschavezf/GiottoVisuals into dev

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• run devtools::document

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• Merge pull request #81 from josschavezf/dev

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Commits on Aug 22, 2024

• chore: formatting

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• chore: add plot save testing

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Commits on Sep 5, 2024

• refactor: plot output and saving

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• chore: docs

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• chore: change param name

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• Merge pull request #85 from jiajic/refactor_plot_output

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• fix: verbose detection

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• enh: update aux_save.R

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• chore: update deps

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• chore: docs

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• chore: code reorganization

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• chore: styler

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• chore: docs

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• chore: fix name collision

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Commits on Sep 6, 2024

• change param name

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• re-export cowplot plot grid

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• fix: coord_fix_ratio passing

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Commits on Sep 11, 2024

• chore: remove reshape2 dependency

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Commits on Sep 12, 2024

• chore: update accessors used

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• Update gg_annotation_raster.R

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Commits on Sep 26, 2024

• chore: comments

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• change: poly color back to grey

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• enh: .gg_theme

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• feat: theme_dark

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• feat: dotPlot()

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• Merge pull request #86 from jiajic/dplot

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• chore: update news

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• chore: docs

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Commits on Sep 27, 2024

• enh: dotPlot()

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• chore: docs

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• Update NEWS.md

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Commits on Oct 4, 2024

• chore: update naming to avoid overlapping

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Commits on Oct 8, 2024

• chore: swap to scales usage

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Commits on Oct 15, 2024

• chore: remove commented ref to combineSpatialCellFeatureInfo()

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Commits on Oct 25, 2024

• !feat: drop RColorBrewer dep

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• chore: remove unused Matrix pkg from suggests

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• chore: cleanup code

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• chore: remove colorbrewer from pkg imports

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• feat: gg_aes and gg_param utilities

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Commits on Oct 27, 2024

• chore: docs

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• chore: cleanup deps

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• chore: fix docs and examples

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• chore: update news

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• chore: bump version for dev

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• chore: fix scoping issue in examples

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• fix merge conflict

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