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Go cam viz#823

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dlrice wants to merge 84 commits intomainebi-uniprot/uniprot-website:mainfrom go-cam-vizebi-uniprot/uniprot-website:go-cam-vizCopy head branch name to clipboard

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Commits

Commits on Jul 22, 2024

• Add @geneontology/wc-gocam-viz/loader package.

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• Add wc-gocam-viz module types.

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• Create GoCamViz wrapper around wc.

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• Add GoCam component.

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• Add GoCap to function section.

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Commits on Jul 23, 2024

• Add go-cam-viz.module.scss

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• Add NoctuaAlliancePathwayPreview url.

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• Style tweak.

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• Snapshot update.

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Commits on Oct 7, 2024

• Merge remote-tracking branch 'origin/main' into go-cam-viz

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Commits on Oct 22, 2024

• Add gocam url; fetch model ids.

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Commits on Oct 23, 2024

• Provide go-cam id selection; styling.

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Commits on Oct 24, 2024

• Use TreeSelect for go-cam model selection.

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• Update Complex Viewer to use TreeSelect rather than drodown.

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• Remove now unused util fn.

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• Update tests.

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Commits on Nov 1, 2024

• Use native select for go-cam model selection; style tweaks.

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• Use native select for complex selection; style tweaks.

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• Try to sort out lazy loading of go-cam.

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• Tidy up InteractionSection.

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• Remove duplicate import.

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• Try to sort out lazy loading of go-cam again.

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• Use tabs for go ribbon and go cam.

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• Import order fix.

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Commits on Nov 11, 2024

• Upgrade @geneontology/wc-gocam-viz to latest version.

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• Add preamble to GO tabs.

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• Add New chip to GO-CAM tab title.

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• Snapshot update.

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Commits on Nov 13, 2024

• Update tab title.

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Commits on Dec 6, 2024

• Only show go-cam models which are uniprotkb curated.

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Commits on Dec 9, 2024

• Report loading and no go-cam models to user.

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• Update go-cam tab title.

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• Snapshot update.

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• Don't cache GO tabs.

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• Only fetch go cam model info if goCamIdToItem has items.

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Commits on Dec 10, 2024

• Merge remote-tracking branch 'origin/main' into go-cam-viz

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• Add help doc links; twerk loading logic.

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Commits on Dec 18, 2024

• Merge remote-tracking branch 'origin/main' into go-cam-viz

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• Adjust coverage.

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Commits on Dec 23, 2024

• Tweak go-cam loading logic.

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• Hide both GO tabs if no GO ids.

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• Update InteractionSection tests.

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• Update comment.

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• Test getGoCamStructures.

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• Test isUniprotCurated.

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• Lower coverage threshold.

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Commits on Jan 7, 2025

• Remove old go help article link.

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Commits on Feb 3, 2025

• Merge remote-tracking branch 'origin/main' into go-cam-viz

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• Update wc-gocam-viz to 1.1.1-beta.3

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Commits on Feb 6, 2025

• Merge remote-tracking branch 'origin/main' into go-cam-viz

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• Upgrade @geneontology/wc-gocam-viz to 1.1.1

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• Adapt GO-CAM model fetching to use p-map.

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Commits on Feb 11, 2025

• Tweak go-cam-viz styles.

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Commits on Feb 13, 2025

• Adapt Tabs.

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• Don't try to goto history tab if already there.

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• Update tabs in the BasketMiniView.

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• Add bordered option to GO tabs and SimilarProteins.

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• Add bordered optoin to SubEntrySimilarProteins, Subcell Location, Stats tabs.

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• Remove unused imports.

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• Conditionally disable GO-CAMs based on reviewed/unreviewed entry type.

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Commits on Feb 17, 2025

• Hide process-label.

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Commits on Feb 18, 2025

• Show relevant viz node as chip above go-cam viz.

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• Add netlify.toml.

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• Gitignore local Netlify folder.

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• Remove unneeded colours import.

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• Use Custom Properties throughout go-cam-viz styles.

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Commits on Feb 19, 2025

• Adapt tests to use real mock data.

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• Use useSafeState in when loading wc-gocam-viz.

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• useSafeState for gocam to node map.

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• Cancel all of the gocam reqeusts if users navigates away.

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• Exclude the organism eg Hsap.

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• Add missing hook dep.

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• Update snapshots.

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• Rename build:ux-netlify to build:netlify

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• Add deploy:netlify script.

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Commits on Feb 20, 2025

• Wording tweak.

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• Try to adjust styles for more consistent link indication.

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• More style tweaks.

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• Make go-cam-viz layout tighter.

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• More white space tweakings.

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• Bold text in the go-cam panel. Tweak colors.

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• Add activity-color-link-hover and tweak button-background-hover color-mix.

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• Case tweak.

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Commits on Feb 21, 2025

• Table and GO tabs spacing tweaks.

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