-
Notifications
You must be signed in to change notification settings - Fork 135
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Update gr_resources.md #1568
base: master
Are you sure you want to change the base?
Update gr_resources.md #1568
Changes from all commits
File filter
Filter by extension
Conversations
Jump to
Diff view
Diff view
There are no files selected for viewing
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,65 +1,52 @@ | ||
--- | ||
|
||
title: Greece | ||
search_exclude: true | ||
description: <!---REPLACE THIS with a one sentence description of the page---> | ||
description: A comprehensive guide to research data management (RDM) in Greece, featuring tools, resources, and services tailored for the life sciences community. | ||
country_code: GR | ||
contributors: [<!---REPLACE THIS with comma separated list of contributors--->] | ||
coordinators: [<!---REPLACE THIS with the name of data management coordinators of your ELIXIR node--->] | ||
contributors: [Eleni Adamidi] | ||
coordinators: [Thanasis Vergoulis, Alexandros Dimopoulos] | ||
|
||
# Link to other pages in the tool assembly section on the RDMkit by listing the page_id | ||
related_pages: | ||
tool_assembly: [<!---REPLACE THIS with the page ID of the tool_assembly pages that you want to list here as related pages--->] | ||
|
||
training: | ||
- name: Training in TeSS | ||
registry: TeSS | ||
url: <!--- https://tess.elixir-europe.org/materials?node=NODENAME ---> | ||
- name: ELIXIR NODENAME community in Zenodo | ||
registry: Zenodo | ||
url: <!--- https://zenodo.org/communities/elixir NODENAME ---> | ||
- name: ELIXIR NODENAME YouTube | ||
registry: YouTube | ||
url: <!--- URL of the channel ---> | ||
- name: <!---REPLACE THIS with the name of your training in registry or platform---> | ||
registry: <!---REPLACE THIS with the name of the registry---> | ||
url: <!---REPLACE THIS with the url of your training registry or platform---> | ||
|
||
# Refer to entries of the "main_tool_ and_resource_table" if institutions, organizations and projects from the country contribute to the development of international tools and resources. | ||
ref_to_main_resources: | ||
- <!---REPLACE THIS with the tool id---> | ||
|
||
# List here tools and resources mainly relevant for the specific country | ||
national_resources: | ||
- name: <!---REPLACE THIS with the national resources about RDM in life sciences such as local instances of tools, guidelines or regulations---> | ||
description: | ||
how_to_access: <!--- REPLACE THIS free text to explain if credentials, login, specific affiliations, etc., are needed to access the resource or tool---> | ||
instance_of: <!--- REPLACE THIS with the tool id of which this resource is an instance of, taken from the all tools and resources file ---> | ||
- name: DMPlanner | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. same with this tool |
||
description: Extensible and searchable catalogue for DMP resources. Currently inactive | ||
url: inactive | ||
|
||
- name: Federated EGA (FEGA) Greece | ||
description: Local EGA implementation by ELIXIR-GR, aligned with the FEGA framework, currently in testing mode. | ||
how_to_access: Restricted to test users; details available upon request. | ||
url: under development | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. When a service has no url, please add it later. There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. but then should it be removed at the moment? rather than saying 'inactive'? There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. indeed. |
||
|
||
- name: Genomic Data Infrastructure (GDI) | ||
description: Infrastructure for secure genomic data management, including storage, discovery, access, and reception. | ||
how_to_access: Login via Life Science (LS) Login required to access ELIXIR-Greece GDI Portal. | ||
related_pages: | ||
tool_assembly: [<!---REPLACE THIS with the page ID of the tool_assembly pages that you want to list here as related pages--->] | ||
your_domain: [<!---REPLACE THIS with the page ID of the domain pages that you want to list here as related pages--->] | ||
your_role: [<!---REPLACE THIS with the page ID of the your_role pages that you want to list here as related pages--->] | ||
your_tasks: [<!---REPLACE THIS with the page ID of the your_tasks pages that you want to list here as related pages--->] | ||
url: | ||
registry: | ||
biotools: <!--- DELETE ME if not needed ---> | ||
fairsharing: <!--- DELETE ME if not needed ---> | ||
tess: <!--- DELETE ME if not needed ---> | ||
--- | ||
<!---All the resources added above will appear on the table at the bottom of the page---> | ||
tool_assembly: Beacon Network, LS AAI, REMS, htsget. | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. These are no page_ids of assemblies |
||
url: https://login.gdi.elixir-greece.org/ | ||
|
||
<!---Following information for the page text---> | ||
<!---Use this template as guidance, all fields are optional. Feel free to modify any section if you think it is necessary---> | ||
<!---If the information is already in another resource, please include the link instead of duplicating information---> | ||
<!---Please focus on resources that are relevant for the whole country for life sciences---> | ||
- name: ARGOS | ||
description: ARGOS is an open, extensible service based on OpenCDMP software that simplifies the creation, management, and validation of research plans, including Data Management Plans (DMPs) and Software Management Plans (SMPs). It integrates with the OpenAIRE Graph, applying FAIR principles to ensure that research outputs are Findable, Accessible, Interoperable, and Reusable. ARGOS also supports research administration by streamlining workflows, enabling researchers, data stewards, and institutions to collaborate effectively in managing both research data and software. With curated templates and tools for planning, validation, and monitoring, ARGOS helps drive best practices in Open Science. | ||
how_to_access: OpenAIRE AAI | ||
url: https://argos.openaire.eu/splash/ | ||
--- | ||
|
||
## Introduction | ||
<!---General RDM considerations for your country, how to deal with RDM on a national level---> | ||
This page provides useful information and resources with a focus on research data management in Greece. An overview of services provided by ELIXIR Greece can be found on the website https://www.elixir-greece.org/node/268. | ||
|
||
## Funders | ||
<!---## Funders---> | ||
|
||
## Regulations | ||
<!---## Regulations---> | ||
<!--- Ethical and legal regulations in the country, committees, etc. ---> | ||
|
||
## Domain-specific infrastructures or resources | ||
<!--- e.g. human data, covid-19. Please, only add domain-specific resources that you think don't fit in the table at the bottom---> | ||
The [Greek COVID-19 Portal](https://covid19dataportal.gr/) provides information, guidelines, tools and services to support researchers to utilise Greek and European infrastructures for data sharing. The portal is a national node of the European COVID-19 Data Portal. | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Maybe this portal could be added as a tool? and this page could be added a a related page: :https://rdmkit.elixir-europe.org/covid19_data_portal |
||
|
||
|
||
## More information | ||
- [ELIXIR-GR: Prospects of data and tools for Elixir-Greece](https://zenodo.org/records/4043630#.ZACFtE_Nx60) | ||
- [The ELIXIR-Greece Galaxy server including best practices tools and workflows for the analysis of SARS-CoV-2 data](https://zenodo.org/records/4042834#.ZACFUk9vD9M) | ||
|
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Coordinators can not be added without them being a contributor