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@epiverse-trace

Epiverse-TRACE

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  1. sivirep sivirep Public

    Data Wrangling and Automated Reports from 'SIVIGILA' source

    R 43 4

  2. epiparameter epiparameter Public

    R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

    R 33 11

  3. serofoi serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    R 17 4

  4. vaccineff vaccineff Public

    R package with tools for estimating vaccine effectiveness and vaccine related metrics

    R 16 3

  5. cfr cfr Public

    R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

    R 13 4

  6. epiCo epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    R 12 1

Repositories

Showing 10 of 59 repositories
  • epiCo Public

    R package for statistical and spatiotemporal modeling of epidemiological data for vector-borne diseases in Colombia

    epiverse-trace/epiCo’s past year of commit activity
    R 12 1 9 1 Updated Jan 8, 2025
  • serofoi Public

    Estimates the Force-of-Infection of a given pathogen from population based sero-prevalence studies

    epiverse-trace/serofoi’s past year of commit activity
    R 17 4 28 4 Updated Jan 8, 2025
  • simulist Public

    An R package for simulating line lists

    epiverse-trace/simulist’s past year of commit activity
    R 5 1 8 0 Updated Jan 8, 2025
  • epiparameter Public

    R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parameters for infectious diseases

    epiverse-trace/epiparameter’s past year of commit activity
    R 33 11 49 (2 issues need help) 0 Updated Jan 8, 2025
  • etdashboard Public

    Developer dashboard for a universe overview of Epiverse-TRACE packages

    epiverse-trace/etdashboard’s past year of commit activity
    R 1 0 0 0 Updated Jan 8, 2025
  • epichains Public

    Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models

    epiverse-trace/epichains’s past year of commit activity
    R 7 2 25 (3 issues need help) 2 Updated Jan 7, 2025
  • etstats Public
    epiverse-trace/etstats’s past year of commit activity
    R 1 CC0-1.0 0 2 0 Updated Jan 7, 2025
  • tutorials-middle Public
    epiverse-trace/tutorials-middle’s past year of commit activity
    R 3 2 66 (2 issues need help) 2 Updated Jan 7, 2025
  • epitkit Public
    epiverse-trace/epitkit’s past year of commit activity
    R 0 2 6 1 Updated Jan 7, 2025
  • epimodelac Public

    Training materials for the epimodelac workshop

    epiverse-trace/epimodelac’s past year of commit activity
    R 8 4 11 2 Updated Jan 7, 2025
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