seeq v1.0

First seeq release (v1.0)

Features:

• DNA/RNA read matching using pattern sequence.
• Levenshtein distance as matching metric.
• Various output formats (count, lines, distance, match position...).
• Support for inverted matching (non-matching sequences).
• Sequence trimming using prefix and suffix options.
• Inputs supported: File or stdin stream.
• Outputs: stdout only.
• Match highlighting in terminal window output.

Known issues:

• Only one match per line supported.
• Multithreading not supported.