Skip to content

Commit

Permalink
deploy: 406eac0
Browse files Browse the repository at this point in the history
  • Loading branch information
artursilva0 committed Nov 22, 2024
0 parents commit 2f757e0
Show file tree
Hide file tree
Showing 438 changed files with 48,532 additions and 0 deletions.
Empty file added .nojekyll
Empty file.
117 changes: 117 additions & 0 deletions articles/about_packages.html
Original file line number Diff line number Diff line change
@@ -0,0 +1,117 @@
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<title>About Packages | CF.Bonsai </title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="title" content="About Packages | CF.Bonsai ">


<link rel="icon" href="../images/logo.svg">
<link rel="stylesheet" href="../public/docfx.min.css">
<link rel="stylesheet" href="../public/main.css">
<meta name="docfx:navrel" content="">
<meta name="docfx:tocrel" content="toc.html">

<meta name="docfx:rel" content="../">


<meta name="docfx:docurl" content="https://github.com/fchampalimaud/cf.bonsai/blob/main/docs/articles/about_packages.md/#L1">
<meta name="loc:inThisArticle" content="In this article">
<meta name="loc:searchResultsCount" content="{count} results for &quot;{query}&quot;">
<meta name="loc:searchNoResults" content="No results for &quot;{query}&quot;">
<meta name="loc:tocFilter" content="Filter by title">
<meta name="loc:nextArticle" content="Next">
<meta name="loc:prevArticle" content="Previous">
<meta name="loc:themeLight" content="Light">
<meta name="loc:themeDark" content="Dark">
<meta name="loc:themeAuto" content="Auto">
<meta name="loc:changeTheme" content="Change theme">
<meta name="loc:copy" content="Copy">
<meta name="loc:downloadPdf" content="Download PDF">

<script type="module" src="./../public/docfx.min.js"></script>

<script>
const theme = localStorage.getItem('theme') || 'auto'
document.documentElement.setAttribute('data-bs-theme', theme === 'auto' ? (window.matchMedia('(prefers-color-scheme: dark)').matches ? 'dark' : 'light') : theme)
</script>

</head>

<body class="tex2jax_ignore" data-layout="" data-yaml-mime="">
<header class="bg-body border-bottom">
<nav id="autocollapse" class="navbar navbar-expand-md" role="navigation">
<div class="container-xxl flex-nowrap">
<a class="navbar-brand" href="../index.html">
<img id="logo" class="svg" src="../images/logo_white.svg" alt="CF.Bonsai">
CF.Bonsai
</a>
<button class="btn btn-lg d-md-none border-0" type="button" data-bs-toggle="collapse" data-bs-target="#navpanel" aria-controls="navpanel" aria-expanded="false" aria-label="Toggle navigation">
<i class="bi bi-three-dots"></i>
</button>
<div class="collapse navbar-collapse" id="navpanel">
<div id="navbar">
<form class="search" role="search" id="search">
<i class="bi bi-search"></i>
<input class="form-control" id="search-query" type="search" disabled="" placeholder="Search" autocomplete="off" aria-label="Search">
</form>
</div>
</div>
</div>
</nav>
</header>

<main class="container-xxl">
<div class="toc-offcanvas">
<div class="offcanvas-md offcanvas-start" tabindex="-1" id="tocOffcanvas" aria-labelledby="tocOffcanvasLabel">
<div class="offcanvas-header">
<h5 class="offcanvas-title" id="tocOffcanvasLabel">Table of Contents</h5>
<button type="button" class="btn-close" data-bs-dismiss="offcanvas" data-bs-target="#tocOffcanvas" aria-label="Close"></button>
</div>
<div class="offcanvas-body">
<nav class="toc" id="toc"></nav>
</div>
</div>
</div>

<div class="content">
<div class="actionbar">
<button class="btn btn-lg border-0 d-md-none" style="margin-top: -.65em; margin-left: -.8em" type="button" data-bs-toggle="offcanvas" data-bs-target="#tocOffcanvas" aria-controls="tocOffcanvas" aria-expanded="false" aria-label="Show table of contents">
<i class="bi bi-list"></i>
</button>

<nav id="breadcrumb"></nav>
</div>

<article data-uid="">
<h1 id="about-packages">About Packages</h1>

<p>Under construction...</p>

</article>

<div class="contribution d-print-none">
<a href="https://github.com/fchampalimaud/cf.bonsai/blob/main/docs/articles/about_packages.md/#L1" class="edit-link">Edit this page</a>
</div>

<div class="next-article d-print-none border-top" id="nextArticle"></div>

</div>

<div class="affix">
<nav id="affix"></nav>
</div>
</main>

<div class="container-xxl search-results" id="search-results"></div>

<footer class="border-top text-secondary">
<div class="container-xxl">
<div class="flex-fill">
<span>&copy; 2024 Champalimaud Foundation and Contributors</span> -<span>Made with <a href="https://dotnet.github.io/docfx">docfx</a></span>
</div>
</div>
</footer>
</body>
</html>
118 changes: 118 additions & 0 deletions articles/harp_old_text.html
Original file line number Diff line number Diff line change
@@ -0,0 +1,118 @@
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<title> | CF.Bonsai </title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="title" content=" | CF.Bonsai ">


<link rel="icon" href="../images/logo.svg">
<link rel="stylesheet" href="../public/docfx.min.css">
<link rel="stylesheet" href="../public/main.css">
<meta name="docfx:navrel" content="">
<meta name="docfx:tocrel" content="toc.html">

<meta name="docfx:rel" content="../">


<meta name="docfx:docurl" content="https://github.com/fchampalimaud/cf.bonsai/blob/main/docs/articles/harp_old_text.md/#L1">
<meta name="loc:inThisArticle" content="In this article">
<meta name="loc:searchResultsCount" content="{count} results for &quot;{query}&quot;">
<meta name="loc:searchNoResults" content="No results for &quot;{query}&quot;">
<meta name="loc:tocFilter" content="Filter by title">
<meta name="loc:nextArticle" content="Next">
<meta name="loc:prevArticle" content="Previous">
<meta name="loc:themeLight" content="Light">
<meta name="loc:themeDark" content="Dark">
<meta name="loc:themeAuto" content="Auto">
<meta name="loc:changeTheme" content="Change theme">
<meta name="loc:copy" content="Copy">
<meta name="loc:downloadPdf" content="Download PDF">

<script type="module" src="./../public/docfx.min.js"></script>

<script>
const theme = localStorage.getItem('theme') || 'auto'
document.documentElement.setAttribute('data-bs-theme', theme === 'auto' ? (window.matchMedia('(prefers-color-scheme: dark)').matches ? 'dark' : 'light') : theme)
</script>

</head>

<body class="tex2jax_ignore" data-layout="" data-yaml-mime="">
<header class="bg-body border-bottom">
<nav id="autocollapse" class="navbar navbar-expand-md" role="navigation">
<div class="container-xxl flex-nowrap">
<a class="navbar-brand" href="../index.html">
<img id="logo" class="svg" src="../images/logo_white.svg" alt="CF.Bonsai">
CF.Bonsai
</a>
<button class="btn btn-lg d-md-none border-0" type="button" data-bs-toggle="collapse" data-bs-target="#navpanel" aria-controls="navpanel" aria-expanded="false" aria-label="Toggle navigation">
<i class="bi bi-three-dots"></i>
</button>
<div class="collapse navbar-collapse" id="navpanel">
<div id="navbar">
<form class="search" role="search" id="search">
<i class="bi bi-search"></i>
<input class="form-control" id="search-query" type="search" disabled="" placeholder="Search" autocomplete="off" aria-label="Search">
</form>
</div>
</div>
</div>
</nav>
</header>

<main class="container-xxl">
<div class="toc-offcanvas">
<div class="offcanvas-md offcanvas-start" tabindex="-1" id="tocOffcanvas" aria-labelledby="tocOffcanvasLabel">
<div class="offcanvas-header">
<h5 class="offcanvas-title" id="tocOffcanvasLabel">Table of Contents</h5>
<button type="button" class="btn-close" data-bs-dismiss="offcanvas" data-bs-target="#tocOffcanvas" aria-label="Close"></button>
</div>
<div class="offcanvas-body">
<nav class="toc" id="toc"></nav>
</div>
</div>
</div>

<div class="content">
<div class="actionbar">
<button class="btn btn-lg border-0 d-md-none" style="margin-top: -.65em; margin-left: -.8em" type="button" data-bs-toggle="offcanvas" data-bs-target="#tocOffcanvas" aria-controls="tocOffcanvas" aria-expanded="false" aria-label="Show table of contents">
<i class="bi bi-list"></i>
</button>

<nav id="breadcrumb"></nav>
</div>

<article data-uid="">

<p>Harp is a standard for asynchronous real-time data acquisition and experimental control in neuroscience. It includes specifications for a lightweight and versatile binary communication protocol, a set of common registers for microcontroller firmware, and a clock synchronization protocol.</p>
<p>The Harp ecosystem currently includes devices to configure, control, and collect data from a wide range of peripheral devices such as cameras, LEDs, nosepokes, and motors. Combining Harp devices is an easy way to extend experimental setup functionality with integrated timestamp synchronisation across devices.</p>
<p>Harp is being developed as a cross-institutional collaboration to develop an ecosystem of high-performance devices that make it easy for scientists to synchronize and extend the functionality of their setups.</p>

</article>

<div class="contribution d-print-none">
<a href="https://github.com/fchampalimaud/cf.bonsai/blob/main/docs/articles/harp_old_text.md/#L1" class="edit-link">Edit this page</a>
</div>

<div class="next-article d-print-none border-top" id="nextArticle"></div>

</div>

<div class="affix">
<nav id="affix"></nav>
</div>
</main>

<div class="container-xxl search-results" id="search-results"></div>

<footer class="border-top text-secondary">
<div class="container-xxl">
<div class="flex-fill">
<span>&copy; 2024 Champalimaud Foundation and Contributors</span> -<span>Made with <a href="https://dotnet.github.io/docfx">docfx</a></span>
</div>
</div>
</footer>
</body>
</html>
137 changes: 137 additions & 0 deletions articles/install_bonsai.html
Original file line number Diff line number Diff line change
@@ -0,0 +1,137 @@
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<title> | CF.Bonsai </title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta name="title" content=" | CF.Bonsai ">


<link rel="icon" href="../images/logo.svg">
<link rel="stylesheet" href="../public/docfx.min.css">
<link rel="stylesheet" href="../public/main.css">
<meta name="docfx:navrel" content="">
<meta name="docfx:tocrel" content="toc.html">

<meta name="docfx:rel" content="../">


<meta name="docfx:docurl" content="https://github.com/fchampalimaud/cf.bonsai/blob/main/docs/articles/install_bonsai.md/#L1">
<meta name="loc:inThisArticle" content="In this article">
<meta name="loc:searchResultsCount" content="{count} results for &quot;{query}&quot;">
<meta name="loc:searchNoResults" content="No results for &quot;{query}&quot;">
<meta name="loc:tocFilter" content="Filter by title">
<meta name="loc:nextArticle" content="Next">
<meta name="loc:prevArticle" content="Previous">
<meta name="loc:themeLight" content="Light">
<meta name="loc:themeDark" content="Dark">
<meta name="loc:themeAuto" content="Auto">
<meta name="loc:changeTheme" content="Change theme">
<meta name="loc:copy" content="Copy">
<meta name="loc:downloadPdf" content="Download PDF">

<script type="module" src="./../public/docfx.min.js"></script>

<script>
const theme = localStorage.getItem('theme') || 'auto'
document.documentElement.setAttribute('data-bs-theme', theme === 'auto' ? (window.matchMedia('(prefers-color-scheme: dark)').matches ? 'dark' : 'light') : theme)
</script>

</head>

<body class="tex2jax_ignore" data-layout="" data-yaml-mime="">
<header class="bg-body border-bottom">
<nav id="autocollapse" class="navbar navbar-expand-md" role="navigation">
<div class="container-xxl flex-nowrap">
<a class="navbar-brand" href="../index.html">
<img id="logo" class="svg" src="../images/logo_white.svg" alt="CF.Bonsai">
CF.Bonsai
</a>
<button class="btn btn-lg d-md-none border-0" type="button" data-bs-toggle="collapse" data-bs-target="#navpanel" aria-controls="navpanel" aria-expanded="false" aria-label="Toggle navigation">
<i class="bi bi-three-dots"></i>
</button>
<div class="collapse navbar-collapse" id="navpanel">
<div id="navbar">
<form class="search" role="search" id="search">
<i class="bi bi-search"></i>
<input class="form-control" id="search-query" type="search" disabled="" placeholder="Search" autocomplete="off" aria-label="Search">
</form>
</div>
</div>
</div>
</nav>
</header>

<main class="container-xxl">
<div class="toc-offcanvas">
<div class="offcanvas-md offcanvas-start" tabindex="-1" id="tocOffcanvas" aria-labelledby="tocOffcanvasLabel">
<div class="offcanvas-header">
<h5 class="offcanvas-title" id="tocOffcanvasLabel">Table of Contents</h5>
<button type="button" class="btn-close" data-bs-dismiss="offcanvas" data-bs-target="#tocOffcanvas" aria-label="Close"></button>
</div>
<div class="offcanvas-body">
<nav class="toc" id="toc"></nav>
</div>
</div>
</div>

<div class="content">
<div class="actionbar">
<button class="btn btn-lg border-0 d-md-none" style="margin-top: -.65em; margin-left: -.8em" type="button" data-bs-toggle="offcanvas" data-bs-target="#tocOffcanvas" aria-controls="tocOffcanvas" aria-expanded="false" aria-label="Show table of contents">
<i class="bi bi-list"></i>
</button>

<nav id="breadcrumb"></nav>
</div>

<article data-uid="">

<h2 id="bonsai-installation">Bonsai Installation</h2>
<p>Before you can use the examples on this website you need to install the following:</p>
<ol>
<li>Download and install the latest version of the <a href="https://bonsai-rx.org/docs/articles/installation.html">Bonsai installer</a>.</li>
<li>Install the Starter package:
<ol>
<li>Open your Bonsai application</li>
<li>Go to Manage Packages</li>
<li>In Package Sources select 'Bonsai'</li>
<li>Search for the Starter package using the browser</li>
<li>Install the package</li>
</ol>
</li>
<li>Install any other packages required by the specific examples you want to run.</li>
</ol>
<h2 id="documentation">Documentation</h2>
<p>Further information can be found here:</p>
<ul>
<li><a href="https://bonsai-rx.org/docs/index.html">Documentation</a>.</li>
<li><a href="https://github.com/orgs/bonsai-rx/discussions">Bonsai discussion forum</a></li>
<li><a href="https://bonsai-rx.org/docs/articles/observables.html">Bonsai Language Guide</a></li>
</ul>

</article>

<div class="contribution d-print-none">
<a href="https://github.com/fchampalimaud/cf.bonsai/blob/main/docs/articles/install_bonsai.md/#L1" class="edit-link">Edit this page</a>
</div>

<div class="next-article d-print-none border-top" id="nextArticle"></div>

</div>

<div class="affix">
<nav id="affix"></nav>
</div>
</main>

<div class="container-xxl search-results" id="search-results"></div>

<footer class="border-top text-secondary">
<div class="container-xxl">
<div class="flex-fill">
<span>&copy; 2024 Champalimaud Foundation and Contributors</span> -<span>Made with <a href="https://dotnet.github.io/docfx">docfx</a></span>
</div>
</div>
</footer>
</body>
</html>
Loading

0 comments on commit 2f757e0

Please sign in to comment.