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susannasiebert committed Mar 2, 2017
1 parent 7a019d3 commit 1dd3ae4
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4 changes: 2 additions & 2 deletions docs/conf.py
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# built documents.
#
# The short X.Y version.
version = '4.0.7'
version = '4.0.8'
# The full version, including alpha/beta/rc tags.
release = '4.0.7'
release = '4.0.8'

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
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16 changes: 5 additions & 11 deletions docs/index.rst
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Expand Up @@ -23,17 +23,11 @@ pVAC-Seq is a cancer immunotherapy pipeline for the identification of **p**\ ers
New in version |version|
------------------------

This version improves the sorting of the final report file. The file will now be
sorted by "Gene Name" and "Mutation" and within these categories by the MT score
- either "Median MT Score" or "Best MT score" depending on the
top-score-metric used.

This release implements a 60 second wait between each request to the IEDB
RESTful API in order to decrease the load on their servers. We recommend the
usage of the :ref:`standalone IEDB tools <iedb_install>` for long-running processes with many
variants, prediction algorithm, epitope lengths, or alleles.

There also have been various bugfixes in this release.
This is a hotfix release. It fixes an error introduced in a previous version
that would occur when using a local installation of the IEDB tools and is
related to some filtering we do on the output from the IEDB tools. More
information can be found on `GitHub issue 278
<https://github.com/griffithlab/pVAC-Seq/issues/278>`_.

Citation
--------
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2 changes: 1 addition & 1 deletion setup.py
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setup(
name="pvacseq",
version="4.0.7",
version="4.0.8",
packages=["pvacseq", "pvacseq.lib", "pvacseq.server"],
entry_points={
"console_scripts":[
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