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add citation for pvacview #1179

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Jan 15, 2025
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add citation for pvacview #1179

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e9ddc74
add citation for pvacview
mhoang22 Jan 10, 2025
ae054e5
add citation to FAQ and index (homepage)
mhoang22 Jan 15, 2025
ab9691b
Merge remote-tracking branch 'origin/master' into add_pvacview_citation
mhoang22 Jan 15, 2025
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2 changes: 2 additions & 0 deletions docs/citation.rst
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Expand Up @@ -19,3 +19,5 @@ L. Griffith, Elaine R. Mardis, and Malachi Griffith. `pVACseq: A genome-guided
in silico approach to identifying tumor neoantigens <http://www.genomemedicine.com/content/8/1/11>`_. Genome Medicine. 2016,
8:11, DOI: 10.1186/s13073-016-0264-5. PMID: `26825632
<http://www.ncbi.nlm.nih.gov/pubmed/26825632>`_.

Huiming Xia, My H. Hoang, Evelyn Schmidt, Susanna Kiwala, Joshua McMichael, Zachary L. Skidmore, Bryan Fisk, Jonathan J. Song, Jasreet Hundal, Thomas Mooney, Jason R. Walker, S. Peter Goedegebuure, Christopher A. Miller, William E. Gillanders, Obi L. Griffith, Malachi Griffith. `pVACview: an interactive visualization tool for efficient neoantigen prioritization and selection <https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-024-01384-7>`_. Genome Medicine. 2024, 16:132, DOI: 10.1186/s13073-024-01384-7. PMID: `39538339 <http://www.ncbi.nlm.nih.gov/pubmed/39538339>`_.
1 change: 1 addition & 0 deletions docs/frequently_asked_questions.rst
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Expand Up @@ -40,3 +40,4 @@ in silico approach to identifying tumor neoantigens <http://www.genomemedicine.c
8:11, DOI: 10.1186/s13073-016-0264-5. PMID: `26825632
<http://www.ncbi.nlm.nih.gov/pubmed/26825632>`_.

Huiming Xia, My H. Hoang, Evelyn Schmidt, Susanna Kiwala, Joshua McMichael, Zachary L. Skidmore, Bryan Fisk, Jonathan J. Song, Jasreet Hundal, Thomas Mooney, Jason R. Walker, S. Peter Goedegebuure, Christopher A. Miller, William E. Gillanders, Obi L. Griffith, Malachi Griffith. `pVACview: an interactive visualization tool for efficient neoantigen prioritization and selection <https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-024-01384-7>`_. Genome Medicine. 2024, 16:132, DOI: 10.1186/s13073-024-01384-7. PMID: `39538339 <http://www.ncbi.nlm.nih.gov/pubmed/39538339>`_.
2 changes: 2 additions & 0 deletions docs/index.rst
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Expand Up @@ -131,6 +131,8 @@ in silico approach to identifying tumor neoantigens <http://www.genomemedicine.c
8:11, DOI: 10.1186/s13073-016-0264-5. PMID: `26825632
<http://www.ncbi.nlm.nih.gov/pubmed/26825632>`_.

Huiming Xia, My H. Hoang, Evelyn Schmidt, Susanna Kiwala, Joshua McMichael, Zachary L. Skidmore, Bryan Fisk, Jonathan J. Song, Jasreet Hundal, Thomas Mooney, Jason R. Walker, S. Peter Goedegebuure, Christopher A. Miller, William E. Gillanders, Obi L. Griffith, Malachi Griffith. `pVACview: an interactive visualization tool for efficient neoantigen prioritization and selection <https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-024-01384-7>`_. Genome Medicine. 2024, 16:132, DOI: 10.1186/s13073-024-01384-7. PMID: `39538339 <http://www.ncbi.nlm.nih.gov/pubmed/39538339>`_.

Source code
-----------
The pVACtools source code is available in `GitHub <https://github.com/griffithlab/pVACtools>`_.
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