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post-preprint release
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quentinblampey committed Dec 24, 2023
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16 changes: 15 additions & 1 deletion README.md
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For a full description of the API, please refer to the [documentation](https://gustaveroussy.github.io/sopa).

# Cite us
Our article is not published yet. In the meantime, you can cite our **preprint**: [TODO - coming soon]
Our article is not published yet. In the meantime, you can cite our [preprint](https://www.biorxiv.org/content/10.1101/2023.12.22.571863v1):

```txt
@article {Blampey2023.12.22.571863,
author = {Quentin Blampey & Kevin Mulder et al.},
title = {Sopa: a technology-invariant pipeline for analyses of image-based spatial-omics},
elocation-id = {2023.12.22.571863},
year = {2023},
doi = {10.1101/2023.12.22.571863},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2023/12/23/2023.12.22.571863},
eprint = {https://www.biorxiv.org/content/early/2023/12/23/2023.12.22.571863.full.pdf},
journal = {bioRxiv}
}
```
15 changes: 13 additions & 2 deletions docs/cite_us.md
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Our paper is available as an Arxiv preprint [here](TODO).
Our article is not published yet. In the meantime, you can cite our [preprint](https://www.biorxiv.org/content/10.1101/2023.12.22.571863v1):

```txt
TODO
@article {Blampey2023.12.22.571863,
author = {Quentin Blampey & Kevin Mulder et al.},
title = {Sopa: a technology-invariant pipeline for analyses of image-based spatial-omics},
elocation-id = {2023.12.22.571863},
year = {2023},
doi = {10.1101/2023.12.22.571863},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2023/12/23/2023.12.22.571863},
eprint = {https://www.biorxiv.org/content/early/2023/12/23/2023.12.22.571863.full.pdf},
journal = {bioRxiv}
}
```

This library has been developed by Quentin Blampey, PhD student in Biomathematics / Deep Learning. The following institutions funded this work:
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2 changes: 1 addition & 1 deletion pyproject.toml
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[tool.poetry]
name = "sopa"
version = "0.2.1"
version = "1.0.0"
description = "Spatial-omics pipeline and analysis"
documentation = "https://gustaveroussy.github.io/sopa"
homepage = "https://gustaveroussy.github.io/sopa"
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