fixing CI to use cellpose

gustaveroussy · Nov 9, 2023 · 677bfb9 · 677bfb9
1 parent e24f7dc
commit 677bfb9
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -36,7 +36,7 @@ jobs:
       #----------------------------------------------
       - name: Install dependencies
         if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true'
-        run: poetry install --extras "dev"
+        run: poetry install --extras "dev cellpose"
       #----------------------------------------------
       #              run test suite
       #----------------------------------------------

diff --git a/pyproject.toml b/pyproject.toml
@@ -22,6 +22,8 @@ isort = { version = "^5.10.1", optional = true }
 pytest = { version = "^7.1.3", optional = true }
 ipykernel = { version = "^6.25.2", optional = true }
 mkdocs-material = { version = "^9.3.2", optional = true }
+mkdocstrings = { version = "^0.23.0", optional = true }
+mkdocstrings-python = { version = "^1.7.3", optional = true }
 
 cellpose = { version = "^2.2.3", optional = true }
 opencv-python = { version = "^4.8.0.76", optional = true }
@@ -30,8 +32,6 @@ toml = { version = "^0.10.2", optional = true }
 loompy = { version = "^3.0.7", optional = true }
 
 tangram-sc = { version = "^1.0.4", optional = true }
-mkdocstrings = { version = "^0.23.0", optional = true }
-mkdocstrings-python = { version = "^1.7.3", optional = true }
 
 [tool.poetry.extras]
 cellpose = ["cellpose", "opencv-python"]