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Merge branch 'feature/fiji-update'
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* feature/fiji-update:
  move to Developer sub-folder
  rename to Update_to_Development_CMTK_GUI.py
  screenshot with basic mode updater
  screenshot of update site
  Update README to prepare for switch to Fiji updater
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jefferis committed Apr 20, 2015
2 parents b122829 + 9565e0f commit f2c6370
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45 changes: 31 additions & 14 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -7,6 +7,34 @@ Install
=======

* Install [Fiji](http://fiji.sc/)
* Enable the **CMTK Registration** update site (http://sites.imagej.net/Jefferis),
by following [these detailed instructions](http://imagej.net/How_to_follow_a_3rd_party_update_site).
The update window should look something like this:
![Fiji Update Site Dialog](Web Resources/Fiji_CMTK_update_site.png).
* Run `Plugins>CMTK Registration>Install CMTK` to install CMTK

Use
===

* **CMTK Registration GUI** is the main entry point
* See [Jefferis Lab Wiki](http://flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=warping_manual:registration_gui)

Update
======

* Use the Fiji updater to update files (but see below for Developer Install/Update)
* To update the CMTK registration software, choose `Install CMTK`
* This will compare the current version on the CMTK website with the installed version and offer to update if appropriate.

Problems
========

* If you have trouble please check the list of [previously reported bugs](https://github.com/jefferis/fiji-cmtk-gui/issues?utf8=%E2%9C%93&q=is%3Aissue+label%3Abug). There may already be a solution.
* See also the [NITRC CMTK User Forum](https://www.nitrc.org/forum/forum.php?forum_id=857)

Developer Install
=================

* Download the [zip file](https://github.com/jefferis/fiji-cmtk-gui/zipball/master) for this repository
* Expand the zip file
* Rename the newly expanded folder to `CMTK_Registration`
Expand All @@ -17,18 +45,7 @@ Install
* (Re)start Fiji
* Choose **Plugins ... CMTK Registration ... Install CMTK**

Update
======
* To update the code for this GUI, choose `Update CMTK GUI`
* To update the CMTK registration software, choose `Install CMTK`
* This will compare the current version on the CMTK website with the installed version and offer to update if appropriate.

Use
===
* **CMTK Registration GUI** is the main entry point
* See [Jefferis Lab Wiki](http://flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=warping_manual:registration_gui)
Developer Update
================

Problems
========
* If you have trouble please check the list of [previously reported bugs](https://github.com/jefferis/fiji-cmtk-gui/issues?utf8=%E2%9C%93&q=is%3Aissue+label%3Abug). There may already be a solution.
* See also the [NITRC CMTK User Forum](https://www.nitrc.org/forum/forum.php?forum_id=857)
* To update the code for this GUI, choose `Update to Development CMTK GUI`
Binary file added Web Resources/Fiji_CMTK_update_site.png
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