Merge branch 'main' into ica

larsoner · Mar 27, 2024 · a4fb2bb · a4fb2bb
2 parents 3f6010f + ed5939a
commit a4fb2bb
Show file tree

Hide file tree

Showing 5 changed files with 13 additions and 8 deletions.
diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
@@ -18,7 +18,7 @@ jobs:
   package:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - name: Set up Python
       uses: actions/setup-python@v5
       with:

diff --git a/.github/workflows/run-tests.yml b/.github/workflows/run-tests.yml
@@ -13,7 +13,7 @@ jobs:
       run:
         shell: bash -l {0}
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - uses: actions/setup-python@v5
       with:
         python-version: "3.11"

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -6,7 +6,7 @@ files: ^(.*\.(py|yaml))$
 exclude: ^(\.[^/]*cache/.*|.*/freesurfer/contrib/.*)$
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.3.3
+    rev: v0.3.4
     hooks:
       - id: ruff
         args: ["--fix"]

diff --git a/docs/source/v1.9.md.inc b/docs/source/v1.9.md.inc
@@ -1,6 +1,8 @@
 ## v1.9.0
 
-[//]: # (### :new: New features & enhancements)
+### :new: New features & enhancements
+
+- Added number of subject to sub-average report (#902 by @SophieHerbst)
 
 [//]: # (- Whatever (#000 by @whoever))
 

diff --git a/mne_bids_pipeline/steps/sensor/_99_group_average.py b/mne_bids_pipeline/steps/sensor/_99_group_average.py
@@ -154,9 +154,12 @@ def average_evokeds(
         for condition, evoked in zip(conditions, evokeds):
             tags = ("evoked", _sanitize_cond_tag(condition))
             if condition in cfg.conditions:
-                title = f"Average (sensor): {condition}"
+                title = f"Average (sensor): {condition}, N = {len(cfg.subjects)}"
             else:  # It's a contrast of two conditions.
-                title = f"Average (sensor) contrast: {condition}"
+                title = (
+                    f"Average (sensor) contrast: {condition}, "
+                    f"N = {len(cfg.subjects)}"
+                )
                 tags = tags + ("contrast",)
 
             report.add_evokeds(
@@ -447,7 +450,7 @@ def average_time_by_time_decoding(
     )
     savemat(out_files["mat"], contrast_score_stats)
 
-    section = "Decoding: time-by-time"
+    section = f"Decoding: time-by-time, N = {len(cfg.subjects)}"
     with _open_report(
         cfg=cfg, exec_params=exec_params, subject=subject, session=session
     ) as report:
@@ -679,7 +682,7 @@ def average_full_epochs_report(
         report.add_figure(
             fig=fig,
             title="Full-epochs decoding",
-            section="Decoding: full-epochs",
+            section=f"Decoding: full-epochs, N = {len(cfg.subjects)}",
             caption=caption,
             tags=(
                 "epochs",