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Update layout_karyogram docs as keepSeqlevels was moved to GenomeInfoDb
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sanchit-saini authored Oct 25, 2023
1 parent f3154ee commit 595b9bd
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion man/layout_karyogram-method.Rd
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Expand Up @@ -78,7 +78,7 @@ autoplot(hg19IdeogramCyto, layout = "karyogram", cytobands = TRUE)
###################################################
### code chunk number 3: change-order
###################################################
library(GenomicRanges)
library(GenomeInfoDb)
hg19 <- keepSeqlevels(hg19IdeogramCyto, paste0("chr", c(1:22, "X", "Y")))
head(hg19)
autoplot(hg19, layout = "karyogram", cytobands = TRUE)
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