Release miniprot-0.4 (r165)

lh3 · Oct 6, 2022 · 2db1509 · 2db1509
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diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,24 @@
+Release 0.4-r165 (5 October 2022)
+---------------------------------
+
+This version implements a better splice model and pays a little more effort in
+aligning terminal exons. It improves both sensitivity and specificity by a few
+percent.
+
+Other notable changes:
+
+ * Breaking change: changed -C to scale the splice model
+
+ * Bugfix: implemented option -w (#12)
+
+ * Bugfix: reduced the indexing time for highly fragmented genomes (#12)
+
+ * New feature: output a Rank attribute in GFF
+
+(0.4: 5 October 2022, r165)
+
+
+
 Release 0.3-r137 (22 September 2022)
 ------------------------------------
 

diff --git a/miniprot.1 b/miniprot.1
@@ -1,4 +1,4 @@
-.TH miniprot 1 "22 September 2022" "miniprot-0.3-dirty (r147)" "Bioinformatics tools"
+.TH miniprot 1 "5 October 2022" "miniprot-0.4 (r165)" "Bioinformatics tools"
 .SH NAME
 .PP
 miniprot - protein-to-genome alignment with splicing and frameshifts

diff --git a/miniprot.h b/miniprot.h
@@ -3,7 +3,7 @@
 
 #include <stdint.h>
 
-#define MP_VERSION "0.3-r164-dirty"
+#define MP_VERSION "0.4-r165"
 
 #define MP_F_NO_SPLICE    0x1
 #define MP_F_NO_ALIGN     0x2