Release miniprot-0.13 (r248)

lh3 · Mar 6, 2024 · fd7369d · fd7369d
1 parent 9eb0117
commit fd7369d
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diff --git a/NEWS.md b/NEWS.md
@@ -1,4 +1,4 @@
-Release 0.13-r247 (6 March 2024)
+Release 0.13-r248 (6 March 2024)
 --------------------------------
 
 Notable changes:
@@ -18,7 +18,7 @@ Notable changes:
  * Bug fix: suppress an extra amino acid in the --trans or --aln output (#47).
    In rare cases, this may lead to memory violation.
 
-(0.13: 6 March 2024, r247)
+(0.13: 6 March 2024, r248)
 
 
 

diff --git a/miniprot.1 b/miniprot.1
@@ -1,4 +1,4 @@
-.TH miniprot 1 "5 March 2024" "miniprot-0.13 (r247)" "Bioinformatics tools"
+.TH miniprot 1 "5 March 2024" "miniprot-0.13 (r248)" "Bioinformatics tools"
 .SH NAME
 .PP
 miniprot - protein-to-genome alignment with splicing and frameshifts

diff --git a/miniprot.h b/miniprot.h
@@ -3,7 +3,7 @@
 
 #include <stdint.h>
 
-#define MP_VERSION "0.13-r247"
+#define MP_VERSION "0.13-r248"
 
 #define MP_F_NO_SPLICE    0x1
 #define MP_F_NO_ALIGN     0x2

diff --git a/nasw-tab.c b/nasw-tab.c
@@ -23,7 +23,7 @@ static const char *ns_tab_codon_all[NS_MAX_TRANS_CODE + 1] = {
    "KNKNTTTT*S*SMIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVV*Y*YSSSSWCWCLFLFX", // 2: The Vertebrate Mitochondrial Code
    "KNKNTTTTRSRSMIMIQHQHPPPPRRRRTTTTEDEDAAAAGGGGVVVV*Y*YSSSSWCWCLFLFX", // 3: The Yeast Mitochondrial Code
    "KNKNTTTTRSRSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVV*Y*YSSSSWCWCLFLFX", // 4: The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code
-   "KNKNTTTTSSSSMIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVV*Y*YSSSSWCWCLFLFX"  // 5: The Invertebrate Mitochondrial Code
+   "KNKNTTTTSSSSMIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVV*Y*YSSSSWCWCLFLFX", // 5: The Invertebrate Mitochondrial Code
    "KNKNTTTTRSRSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVVQYQYSSSS*CWCLFLFX", // 6: Ciliate Nuclear; Dasycladacean Nuclear; Hexamita Nuclear
    0, // 7
    0, // 8
@@ -51,7 +51,7 @@ static const char *ns_tab_codon_all[NS_MAX_TRANS_CODE + 1] = {
    "KNKNTTTTRSRSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVVEYEYSSSS*CWCLFLFX", // 30: Peritrich Nuclear
    "KNKNTTTTRSRSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVVEYEYSSSSWCWCLFLFX", // 31: Blastocrithidia Nuclear
    "KNKNTTTTRSRSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVV*YWYSSSS*CWCLFLFX", // 32: Balanophoraceae Plastid
-   "KNKNTTTTSSKSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVVYY*YSSSSWCWCLFLFX", // 33: Cephalodiscidae Mitochondrial
+   "KNKNTTTTSSKSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVVYY*YSSSSWCWCLFLFX"  // 33: Cephalodiscidae Mitochondrial
 };
 
 uint8_t ns_tab_nt4[256], ns_tab_aa20[256], ns_tab_aa13[256], ns_tab_codon[64], ns_tab_codon13[64];