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  1. scLVM scLVM Public

    Forked from PMBio/scLVM

    scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources, thereby allowing for the correction of confounding sources…

    HTML

  2. circos circos Public

    Forked from vigsterkr/circos

    Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions.

    Perl

  3. SciDB-Py SciDB-Py Public

    Forked from bowenli37/SciDB-py

    Python wrapper for SciDB queries

    Python

  4. cufflinks cufflinks Public

    Forked from cole-trapnell-lab/cufflinks

    C++

  5. cgpBattenberg cgpBattenberg Public

    Forked from cancerit/cgpBattenberg

    Battenberg algorithm and associated implementation script

    R

  6. SIMLR SIMLR Public

    Forked from BatzoglouLabSU/SIMLR

    Implementations both in R and Matlab of SIMLR (https://www.nature.com/articles/nmeth.4207) and CIMLR (https://www.biorxiv.org/content/early/2018/02/16/267245) Multi-kernel LeaRning methods.

    C++