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Menche Lab

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  1. VRNetzer VRNetzer Public

    A Virtual Reality platform for interactive, immersive network exploration.

    34 3

  2. MultiOme MultiOme Public

    Network-based project to explore gene connectivity through biological scales

    HTML 23 5

  3. CartoGRAPHs CartoGRAPHs Public

    HTML 22 3

  4. BioProfiling.jl BioProfiling.jl Public

    A flexible Julia toolkit for high-dimensional cellular profiles

    Julia 13 1

  5. DataDiVR_WebApp DataDiVR_WebApp Public

    JavaScript 10 4

  6. Perturbome Perturbome Public

    Code to reproduce the study: Mapping the perturbome network of cellular perturbations.

    Jupyter Notebook 8 6

Repositories

Showing 10 of 48 repositories
  • Radhouani_2025_scRNAseq Public

    scRNA-seq analysis for Radhouani et al, Science Immunology, 2025.

    menchelab/Radhouani_2025_scRNAseq’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2025
  • Radhouani_2025_QuantSeq Public

    QuantSeq analysis from Radhouani et al., 2025, Science Immunology.

    menchelab/Radhouani_2025_QuantSeq’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2025
  • SA_bone_marrow_scRNAseq Public

    scRNA-seq analysis for Radhouani et al, Science Immunology, 2025.

    menchelab/SA_bone_marrow_scRNAseq’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2025
  • SA_bone_marrow_QuantSeq Public
    menchelab/SA_bone_marrow_QuantSeq’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 19, 2025
  • DataDiVR_WebApp Public
    menchelab/DataDiVR_WebApp’s past year of commit activity
    JavaScript 10 MIT 4 18 0 Updated Jan 5, 2025
  • datadivr Public

    datadivr toolset

    menchelab/datadivr’s past year of commit activity
    Python 0 MIT 1 8 1 Updated Jan 3, 2025
  • Exposome Public template

    This repository will contain the analyses for the human exposure network paper

    menchelab/Exposome’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 30, 2024
  • rgb4k Public

    this about color rgb rainbow max experience force lumination

    menchelab/rgb4k’s past year of commit activity
    Python 0 0 0 0 Updated Nov 17, 2024
  • Neuwirth_Malzl_et_al_2024 Public

    Code repository for all analyses shown in Neuwirth and Malzl et al. 2024

    menchelab/Neuwirth_Malzl_et_al_2024’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Nov 5, 2024
  • sctools Public

    Collection of helper functions to make large scale single cell analysis more bearable

    menchelab/sctools’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 23, 2024
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