cat on bins corrected error message, #168

metagenome-atlas · Feb 12, 2019 · 687d6db · 687d6db
1 parent 326bc37
commit 687d6db
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/atlas/rules/cat_taxonomy.smk b/atlas/rules/cat_taxonomy.smk
@@ -31,7 +31,7 @@ rule cat_on_bin:
         flag=CAT_flag_downloaded,
         genome= "genomes/taxonomy/{genome}/{genome}.fasta",
     output:
-        expand("genomes/taxonomy/{genome}/{genome}.{extension}",
+        expand("genomes/taxonomy/{{genome}}/{{genome}}.{extension}",
         extension=['bin2classification.txt',
                    'concatenated.alignment.diamond',
                    'ORF2LCA.txt','log'])