Skip to content

Commit

Permalink
update URL link
Browse files Browse the repository at this point in the history
  • Loading branch information
LucieContamin authored Nov 9, 2023
1 parent 2d2d2f1 commit 1f77cc9
Showing 1 changed file with 10 additions and 6 deletions.
16 changes: 10 additions & 6 deletions rounds/round1.md
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@ structure is as follows:
### Assumptions regarding RSV interventions

Weekly cumulative age-specific coverage for vaccines and monoclonals are
[provided](./auxiliary-data//vaccine_coverage/RSV_round1_Coverage_2023_2024.csv).
[provided](https://github.com/midas-network/rsv-scenario-modeling-hub/blob/main/auxiliary-data/vaccine_coverage/RSV_round1_Coverage_2023_2024.csv).

We describe important details of the planned implementation of RSV
interventions below as well as our rationale for vaccine coverage and
Expand Down Expand Up @@ -94,7 +94,8 @@ coverage assumptions, while we have chosen optimistic levels of coverage that
would reflect potential benefits in a future season with no shortage and more
awareness of these interventions.
**Senior and infant vaccination coverage curves are provided for all projection weeks and target locations**,
in the [Github auxiliary data folder](./auxiliary-data/vaccine_coverage/)
in the
[Github auxiliary data folder](https://github.com/midas-network/rsv-scenario-modeling-hub/blob/main/auxiliary-data/)

##### VE Assumptions

Expand Down Expand Up @@ -179,7 +180,8 @@ acute care hospitals in a subset of states (12 states as of August 2023).
Age-specific weekly rates per 100,000 population are reported in this system.

The data has been standardized and posted on the
[SMH RSV github target-data/ folder](./target-data/) and is updated weekly.
[SMH RSV github target-data/ folder](https://github.com/midas-network/rsv-scenario-modeling-hub/blob/main/target-data/)
and is updated weekly.
**The target in this data is the weekly number of hospitalizations in each given state (inc_hosp variable), for all ages and by age group**.
To obtain counts, we have converted RSV-NET weekly rates based on state
population sizes. This method assumes that RSV-NET hospitals are representative
Expand All @@ -198,7 +200,8 @@ the projections.
#### Other RSV datasets available for calibration

A few auxiliary datasets have been posted in the GitHub repositority
[auxiliary-data/ folder](./auxiliary-data/) including:
[auxiliary-data/ folder](https://github.com/midas-network/rsv-scenario-modeling-hub/blob/main/auxiliary-data/)
including:

- state-specific CDC surveillance from NVERSS (only last year of data available)
- state-specific ED data (only last year of data available)
Expand All @@ -223,7 +226,8 @@ counts, as well as for hospital admission peak size and peak timing.
admissions, based on RSV-NET. This dataset is updated daily and covers
2017-2023. There should be no adjustment for reporting (=raw data from
RSV-NET dataset to be projected). A current and standardized version of
the weekly data has been posted [here](./target-data/)
the weekly data has been posted
[here](https://github.com/midas-network/rsv-scenario-modeling-hub/blob/main/target-data/)
- No infection target
- No case target
- No death target
Expand Down Expand Up @@ -327,7 +331,7 @@ low level masking is allowed at groups’ discretion.
We leave seeding intensity, timing and geographic distribution at the
discretion of the teams. In addition to the RSV-NET hospital admission
dataset, CDC’s NVERSS
[viral surveillance dataset](https://github.com/midas-network/rsv-scenario-modeling-hub)
[viral surveillance dataset](https://github.com/midas-network/rsv-scenario-modeling-hub/tree/main/auxiliary-data)
is a good resource for state-specific information on epidemic intensity
(e.g., weekly % positive, or weekly ILI*%positive), and can be used to adjust
seeding.
Expand Down

0 comments on commit 1f77cc9

Please sign in to comment.