Added to the JSON output file

neurobagel · Oct 25, 2023 · ba5cb85 · ba5cb85
1 parent c5990af
commit ba5cb85
Showing 1 changed file with 28 additions and 9 deletions.
diff --git a/store/index.js b/store/index.js
@@ -48,7 +48,7 @@ export const state = () => ({
 
     categories: {
 
-        "Subject ID": {},
+        "Participant ID": {},
         "Age": {
 
             componentName: "annot-continuous-values",
@@ -89,7 +89,7 @@ export const state = () => ({
 
         categoryToColorMap: {
 
-            "Subject ID": "color1",
+            "Participant ID": "color1",
             "Age": "color2",
             "Sex": "color3",
             "Diagnosis": "color4",
@@ -98,7 +98,7 @@ export const state = () => ({
 
         categoryClasses: {
 
-            "Subject ID": "category-style-1",
+            "Participant ID": "category-style-1",
             "Age": "category-style-2",
             "Sex": "category-style-3",
             "Diagnosis": "category-style-4",
@@ -439,6 +439,19 @@ export const getters = {
 
                         columnOutput = p_getters.getContinuousJsonOutput(columnName);
                         break;
+
+                    default:
+                        columnOutput = {
+                            "Description": "A participant ID",
+                            Annotations: {
+
+                                IsAbout: {
+                                    Label: "Subject Unique Identifier",
+                                    TermURL: "nb:ParticipantID"
+                                },
+                                Identifies: "participant"
+                            }
+                        };
                 }
 
             }
@@ -638,23 +651,23 @@ export const getters = {
 
             case "annotation": {
 
-                // 1. Make sure one (and only one) column has been categorized as 'Subject ID'
+                // 1. Make sure one (and only one) column has been categorized as 'Participant ID'
                 const singleSubjectIDColumn = ( 1 === Object.values(p_state.columnToCategoryMap)
-                                                            .filter(category => "Subject ID" === category)
+                                                            .filter(category => "Participant ID" === category)
                                                             .length );
 
-                // 2. Make sure at least one other category other than 'Subject ID' has been linked to a column
+                // 2. Make sure at least one other category other than 'Participant ID' has been linked to a column
                 const notOnlySubjectIDCategorized = ( Object.values(p_state.columnToCategoryMap)
-                                                            .filter(category => "Subject ID" !== category &&
+                                                            .filter(category => "Participant ID" !== category &&
                                                                     null !== category)
                                                             .length >= 1 );
 
 // 3. Make sure all columns about assessment tools are mapped to something
                 const allAssessmentColumnsAreMapped = p_getters.getColumnsForCategory("Assessment Tool")
                     .every(column => p_state.columnToToolMap[column] !== null);
                 // Annotation page is only accessible if one (and only one)
-                // column has been categorized as 'Subject ID' and if at least
-                // one category other than Subject ID has been categorized
+                // column has been categorized as 'Participant ID' and if at least
+                // one category other than Participant ID has been categorized
                 pageAccessible = singleSubjectIDColumn && notOnlySubjectIDCategorized && allAssessmentColumnsAreMapped;
 
                 break;
@@ -722,6 +735,12 @@ export const mutations = {
         // NOTE: The latter are initialized here to eliminate checks for their
         // nullness in other store functions
         switch ( p_state.columnToCategoryMap[columnName] ) {
+            case "Participant ID":
+                p_state.dataDictionary.annotated[columnName] = Object.assign(
+                    {},
+                    p_state.dataDictionary.userProvided[columnName]
+                );
+                break;
 
             case "Age":