Update fetch-from-rki-*

- Use the github.com URL to auto redirect to the Git LFS location - add `--location` flag to follow redirect - updated branch to `HEAD` to always point to the default branch Resolves <#487>
nextstrain · Jan 23, 2025 · b5f4c8d · b5f4c8d
1 parent e359b7e
commit b5f4c8d
Show file tree

Hide file tree

Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/SARS-CoV-2-Sequenzdaten_Deutschland.tsv.xz b/SARS-CoV-2-Sequenzdaten_Deutschland.tsv.xz
diff --git a/bin/fetch-from-rki-metadata b/bin/fetch-from-rki-metadata
@@ -1,6 +1,6 @@
 #!/bin/bash
 set -euo pipefail
 
-curl "https://raw.githubusercontent.com/robert-koch-institut/SARS-CoV-2-Sequenzdaten_aus_Deutschland/main/SARS-CoV-2-Sequenzdaten_Deutschland.tsv.xz" \
-    --fail --silent --show-error --http1.1 \
+curl "https://github.com/robert-koch-institut/SARS-CoV-2-Sequenzdaten_aus_Deutschland/raw/HEAD/SARS-CoV-2-Sequenzdaten_Deutschland.tsv.xz" \
+    --fail --silent --show-error --http1.1 --location \
     --header 'User-Agent: https://github.com/nextstrain/ncov-ingest ([email protected])'
diff --git a/bin/fetch-from-rki-sequences b/bin/fetch-from-rki-sequences
@@ -1,6 +1,6 @@
 #!/bin/bash
 set -euo pipefail
 
-curl "https://raw.githubusercontent.com/robert-koch-institut/SARS-CoV-2-Sequenzdaten_aus_Deutschland/master/SARS-CoV-2-Sequenzdaten_Deutschland.fasta.xz" \
-    --fail --silent --show-error --http1.1 \
+curl "https://github.com/robert-koch-institut/SARS-CoV-2-Sequenzdaten_aus_Deutschland/raw/HEAD/SARS-CoV-2-Sequenzdaten_Deutschland.fasta.xz" \
+    --fail --silent --show-error --http1.1 --location \
     --header 'User-Agent: https://github.com/nextstrain/ncov-ingest ([email protected])'