Fix setonix account env variable

nf-core · Oct 14, 2023 · 06115d0 · 06115d0
1 parent 7a4cbfd
commit 06115d0
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/pawsey_setonix.config b/conf/pawsey_setonix.config
@@ -21,7 +21,7 @@ executor {
 // See: https://support.pawsey.org.au/documentation/pages/viewpage.action?pageId=121479736#RunningJobsonSetonix-Overview
 process {
   executor = 'slurm'
-  clusterOptions = "--account=${PAWSEY_PROJECT}"
+  clusterOptions = "--account=${System.getenv('PAWSEY_PROJECT')}"
   module = 'singularity/3.11.4-slurm'
   cache = 'lenient'
   stageInMode = 'symlink'