fix: various problems

nipreps · Sep 10, 2024 · 52e65c4 · 52e65c4
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diff --git a/docs/assets/fmriprep-bootcamp-geneva2024/day1-03-bids-hands-on/index.html b/docs/assets/fmriprep-bootcamp-geneva2024/day1-03-bids-hands-on/index.html
@@ -871,6 +871,8 @@
 
 # Those having issues on bamboo
 
+Add to the end of your `$HOME/.bashrc`:
+
 ``` Bash
 # >>> conda initialize >>>
 # !! Contents within this block are managed by 'conda init' !!

diff --git a/docs/assets/fmriprep-bootcamp-geneva2024/day1-06-apptainer/index.html b/docs/assets/fmriprep-bootcamp-geneva2024/day1-06-apptainer/index.html
@@ -493,7 +493,7 @@
 
 srun apptainer run mriqc_latest.sif \
      $HOME/ds005454/ $HOME/derivatives/mriqc-24.0.2 participant \
-     -m T1w -vv --dsname bootcamp --nprocs 16 --omp-nthreads 8
+     -m T1w -vv --dsname bootcamp --nprocs 12 --omp-nthreads 8
 
 ```
 

diff --git a/docs/users/educational.md b/docs/users/educational.md
@@ -8,6 +8,8 @@
 - [BIDS Hands-on](../../assets/fmriprep-bootcamp-geneva2024/day1-03-bids-hands-on)
 - [Data and HPC](../../assets/fmriprep-bootcamp-geneva2024/day1-04-data-and-hpc)
 - [Containers](../../assets/fmriprep-bootcamp-geneva2024/day1-05-containers)
+- [Apptainer in UNIGE's HPC](../../assets/fmriprep-bootcamp-geneva2024/day1-06-apptainer)
+- [Links](../../assets/fmriprep-bootcamp-geneva2024/day2-links)
 
 ## Online books