Repositories list

• OrthologAL

  Public
  OrthologAL: A Shiny application for the humanization of non-human pre-clinical high-dimensional gene expression data

  R

  •0•0•0•0•Updated Jan 17, 2025Jan 17, 2025

• scZeroDay

  Public
  R

  •

  MIT License

  •0•0•0•0•Updated Jul 24, 2024Jul 24, 2024

• ISOSCELES

  Public
  ISOSCELES operates through the integration of drug-response transcriptional consensus signatures (TCSs) derived from the LINCS L1000 dataset with multi-subject single-cell RNA sequencing data, and facilitates analysis of drug and cell connectivity as a function of expression discordance from multiple perspectives.

  R

  •0•0•0•0•Updated Apr 3, 2024Apr 3, 2024

• SpinalCord_RM1

  Public
  Applying spatial transcriptomics on spinalcord data

  R

  •

  Eclipse Public License 2.0

  •0•0•0•0•Updated Nov 30, 2023Nov 30, 2023

• spatial_transciptomics_GBM

  Public
  It analyzes space ranger output of 11 brain tumor samples to see specific genes location,how it is expressed and also testing multiple experiments on this spatial data with our pipeline

  R

  •0•0•0•0•Updated Nov 30, 2023Nov 30, 2023

• ISOSCELES-dataProcessing

  Public
  Processing pipelines used in Suter et al.

  R

  •0•0•0•0•Updated Nov 9, 2023Nov 9, 2023

• alisertib-analysis

  Public
  R

  •0•0•0•0•Updated Sep 27, 2023Sep 27, 2023

• tableApp

  Public
  R

  •1•0•0•0•Updated Jul 18, 2022Jul 18, 2022

• UM002-scPerturbation

  Public
  single-cell RNA sequencing analysis of xenograft tumors

  R

  •1•0•0•0•Updated Oct 5, 2021Oct 5, 2021

• CloudASM

  Public
  Shell

  •

  MIT License

  •6•0•0•0•Updated Aug 6, 2020Aug 6, 2020