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@PredictiveEcology Predictive Ecology Group

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    128 repositories

    • reproducible

      Public
      A set of tools for R that enhance reproducibility beyond package management
      reproducible-researchr-packagereproducibility
      R
      •16•41•19•3•Updated Jan 10, 2025Jan 10, 2025

    • Biomass_borealDataPrep

      Public
      Module to parameterize the Landis Biomass Succession Model in R, for the Canadian Boreal forest
      HTML
      •
      Other
      •4•2•12•1•Updated Jan 9, 2025Jan 9, 2025

    • scfm

      Public
      Steve Cumming Fire Model (wildfire ignition, escape, and spread)
      simulation-modelingwildfire
      R
      •6•1•11•0•Updated Jan 9, 2025Jan 9, 2025

    • actions

      Public
      collection of GitHub Actions workflows
      MIT License
      •1•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • CBM_dataPrep_SK

      Public
      HTML
      •
      Other
      •3•0•3•2•Updated Jan 8, 2025Jan 8, 2025

    • LandR

      Public
      Landscape Ecosystem Modelling in R
      r-packagespadesecological-modellinglandscape-ecosystem-modelling
      R
      •
      GNU General Public License v3.0
      •10•17•12•0•Updated Jan 8, 2025Jan 8, 2025

    • spadesCBM

      Public
      R
      •1•2•0•0•Updated Jan 7, 2025Jan 7, 2025

    • CBM_core

      Public
      R
      •
      Other
      •3•0•6•2•Updated Jan 7, 2025Jan 7, 2025

    • CBM_vol2biomass

      Public
      R
      •
      Other
      •2•0•4•0•Updated Jan 6, 2025Jan 6, 2025

    • SpaDES.core

      Public
      Core functionality for Spatial Discrete Event Simulation (SpaDES)
      simulation-frameworkr-packagesimulation-modelingdiscrete-events-simulations
      R
      •
      GNU General Public License v3.0
      •17•9•24•3•Updated Dec 21, 2024Dec 21, 2024

    • clusters

      Public
      Utilities to evaluate and optimize selection of clusters of machines for parallel R operations
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Dec 20, 2024Dec 20, 2024

    • fireSenseUtils

      Public
      Utilites for working with the 'fireSense' group of 'SpaDES' modules
      R
      •
      GNU General Public License v3.0
      •3•1•6•0•Updated Dec 20, 2024Dec 20, 2024

    • fireSense_SpreadFit

      Public
      Repository of fireSense_SpreadFit, a SpaDES module
      spades-modulefiresense
      R
      •
      Other
      •2•1•2•0•Updated Dec 20, 2024Dec 20, 2024

    • SpaDES.project

      Public
      Project Templates Using 'SpaDES'
      R
      •7•3•10•1•Updated Dec 20, 2024Dec 20, 2024

    • scfmutils

      Public
      tools and utilities for working with scfm wildfire simulation model
      R
      •
      GNU General Public License v3.0
      •1•0•2•0•Updated Dec 20, 2024Dec 20, 2024

    • fireSense_dataPrepPredict

      Public
      R
      •
      Other
      •1•0•1•0•Updated Dec 20, 2024Dec 20, 2024

    • PredictiveEcology.org

      Public
      A blog about prediction in ecology: the science, the complexity and the computation
      R
      •564•2•10•0•Updated Dec 20, 2024Dec 20, 2024

    • fireSense_IgnitionPredict

      Public
      Repository of fireSense_IgnitionPredict, a SpaDES module
      R
      •
      Other
      •2•1•2•0•Updated Dec 20, 2024Dec 20, 2024

    • CBM_defaults

      Public
      R
      •
      Other
      •2•0•1•0•Updated Dec 19, 2024Dec 19, 2024

    • fireSense_IgnitionFit

      Public
      Repository of fireSense_IgnitionFit, a SpaDES module
      R
      •
      Other
      •3•1•7•0•Updated Dec 19, 2024Dec 19, 2024

    • fireSense_dataPrepFit

      Public
      HTML
      •
      Other
      •2•0•2•0•Updated Dec 19, 2024Dec 19, 2024

    • Require

      Public
      Simple R package to install and load packages conducive to a reproducible workflow
      R
      •6•21•3•1•Updated Dec 17, 2024Dec 17, 2024

    • pemisc

      Public
      Miscellaneous utilities developed by the Predictive Ecology Lab Group
      r-packagelandscape-ecologysimulation-modeling
      HTML
      •
      GNU General Public License v3.0
      •1•1•1•0•Updated Dec 17, 2024Dec 17, 2024

    • canClimateData

      Public
      Prepare Canadian historic and projected climate data for use with LandR.CS and fireSense
      R
      •2•0•2•1•Updated Dec 13, 2024Dec 13, 2024

    • Biomass_speciesData

      Public
      HTML
      •
      Other
      •3•2•10•0•Updated Dec 13, 2024Dec 13, 2024

    • fireSenseManual

      Public
      R
      •0•0•0•0•Updated Nov 26, 2024Nov 26, 2024

    • map

      Public
      Defines a meta class of geographical objects, the 'map' class, which is a collection of map objects (sp, raster, sf), with a number of metadata additions to enable powerful methods, e.g., for leaflet, reproducible GIS, etc.
      r-package
      R
      •
      GNU General Public License v3.0
      •0•2•7•0•Updated Nov 26, 2024Nov 26, 2024

    • SpaDES.experiment

      Public
      Simulation experiments within the SpaDES ecosystem.
      r-packagesimulation-experiments
      R
      •
      GNU General Public License v3.0
      •2•1•7•0•Updated Nov 25, 2024Nov 25, 2024

    • SpaDES.shiny

      Public
      Utilities for building 'shiny' apps for 'SpaDES' simulations
      r-packageshiny-apps
      R
      •
      GNU General Public License v3.0
      •2•4•14•0•Updated Nov 25, 2024Nov 25, 2024

    • CBMutils

      Public
      Utilities for modelling carbon in R based on CBM-CFS3
      R
      •1•0•5•0•Updated Nov 25, 2024Nov 25, 2024