add necessary r packages to using conda

export env. file to environment.yml and rebuild.

conda env export > environment.yml

run with (where required input is in /demo)

docker run --rm -it --volume="$(pwd):/workdir" --workdir=/workdir/demo plaquette/r_helper:dev bash -c "Rscript ..."

to build:

docker build -t plaquette/r_helper:dev .

to push

docker push plaquette/r_helper:dev