Merge pull request #153 from marshall-lab/fix-scott-haart

fix: use prob instead of timeline scaling
pph-collective · Feb 1, 2021 · 600cd02 · 600cd02
2 parents c3430ca + fde88cb
commit 600cd02
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Showing 2 changed files with 1 addition and 21 deletions.
diff --git a/titan/settings/scott/demographics.yml b/titan/settings/scott/demographics.yml
@@ -49,7 +49,7 @@ demographics:
                   stop: 999
               adherence:
                 init: 1.0
-                prob: 1.0
+                prob: 0.7
               discontinue: 0.000
             death_rate:
               base: 16.6

diff --git a/titan/settings/scott/model.yml b/titan/settings/scott/model.yml
@@ -87,26 +87,6 @@ timeline_scaling:
       start_time: -47
       stop_time: 9999
       scalar: 0
-    adh_prob_HF_None:  # make viral suppression probability 0.7 after initial pop creation
-      parameter: demographics|white|sex_type|HF|drug_type|None|haart|adherence
-      start_time: -47
-      stop_time: 9999
-      scalar: 0.7
-    adh_prob_HM_None:   # make viral suppression probability 0.7 after initial pop creation
-      parameter: demographics|white|sex_type|HM|drug_type|None|haart|adherence
-      start_time: -47
-      stop_time: 9999
-      scalar: 0.7
-    adh_prob_HF_Inj:  # make viral suppression probability 0.7 after initial pop creation
-      parameter: demographics|white|sex_type|HF|drug_type|Inj|haart|adherence
-      start_time: -47
-      stop_time: 9999
-      scalar: 0.7
-    adh_prob_HM_Inj:  # make viral suppression probability 0.7 after initial pop creation
-      parameter: demographics|white|sex_type|HM|drug_type|Inj|haart|adherence
-      start_time: -47
-      stop_time: 9999
-      scalar: 0.7
 
 classes:
   sex_types: