docs: add deprecation message for qq auto

src/qibocal/cli/_base.py

@@ -236,3 +236,48 @@ def upload(path, tag, author):
 )
 def compare(report_1_path, report_2_path, folder, force):
     compare_reports(folder, report_1_path, report_2_path, force)
+
+
+@command.command(context_settings=CONTEXT_SETTINGS, deprecated=True)
+@click.argument(
+    "runcard", metavar="RUNCARD", type=click.Path(exists=True, path_type=pathlib.Path)
+)
+@click.option(
+    "folder",
+    "-o",
+    type=click.Path(path_type=pathlib.Path),
+    help="Output folder. If not provided a standard name will generated.",
+)
+@click.option(
+    "force",
+    "-f",
+    is_flag=True,
+    help="Use --force option to overwrite the output folder.",
+)
+@click.option(
+    "--update/--no-update",
+    default=True,
+    help="Use --no-update option to avoid updating iteratively the platform."
+    "With this option the new runcard will not be produced.",
+)
+@click.option(
+    "--platform",
+    default=None,
+    help="Name of the Qibolab platform.",
+)
+@click.option(
+    "--backend",
+    default=None,
+    help="Name of the Qibo backend.,",
+)
+def auto(runcard, folder, force, update, platform, backend):
+    """Execute the qubit calibration.
+
+    Arguments:
+
+     - RUNCARD: runcard with declarative inputs.
+    """
+    click.echo(
+        "Warning: This command is deprecated and may be removed in a future version. Please use 'qq run' instead. ",
+        err=True,
+    )