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2025.01
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antgonza committed Jan 10, 2025
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14 changes: 13 additions & 1 deletion CHANGELOG.md
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# Qiita changelog

Version 2025.01
---------------

Deployed on January 15th, 2025

* The Analysis owner is now displayed in the analysis list and the individual analysis page.
* Admins can now use the per-preparation "Download Data Release" button to get a "BIOM" release; this version is focus on NPH data releases.
* Improved complete_job creation time, which should result in Qiita jobs ([multiple steps](https://qiita.ucsd.edu/static/doc/html/dev/resource_allocation.html) finishing faster; for bencharks visit [patch 93.sql](https://github.com/qiita-spots/qiita/blob/master/qiita_db/support_files/patches/93.sql).
* SPP improvements: TellSeq support added; plugin refactored to allow for easier additions like TellSeq in the future. Job restart greatly improved. Much improved handling of sample-names and ids that contain substrings like ‘I1’ and ‘R2’. New SequenceCount job can count sequences and base-paris in parallel for any list of fastq files.
* Other general fixes [#3440](https://github.com/qiita-spots/qiita/pull/3440), [#3445](https://github.com/qiita-spots/qiita/pull/3445), [#3446](https://github.com/qiita-spots/qiita/pull/3446),


Version 2024.10
---------------

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* Allow chucked download of metadata files in analyses; this allows to process large meta-analysis (like those for The Microsetta Initiative) without worker blockage.
* Added to the qp-qiime2 plugin the possibility of filtering tables based on system available "FeatureData[Sequence]"; to start we added 90/100/150 bps bloom tables.
* Now we can instantiate a study via their title (Study.from_title); this will facilitate orchestration with qebil.
* Speed up Study listing for admins and general users; the admin study display came down from 20 to 2 seconds.
* Speed up Study listing for admins and general users; the admin study display came down from 20 to 2 seconds.
* Fixed the following issues: [3142](https://github.com/qiita-spots/qiita/issues/3142), [3149](https://github.com/qiita-spots/qiita/issues/3149), [3150](https://github.com/qiita-spots/qiita/issues/3150), [3119](https://github.com/qiita-spots/qiita/issues/3119), and [3160](https://github.com/qiita-spots/qiita/issues/3160).


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2 changes: 1 addition & 1 deletion qiita_core/__init__.py
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# The full license is in the file LICENSE, distributed with this software.
# -----------------------------------------------------------------------------

__version__ = "2024.10"
__version__ = "2025.01"
2 changes: 1 addition & 1 deletion qiita_db/__init__.py
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from . import user
from . import processing_job

__version__ = "2024.10"
__version__ = "2025.01"

__all__ = ["analysis", "artifact", "archive", "base", "commands",
"environment_manager", "exceptions", "investigation", "logger",
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2 changes: 1 addition & 1 deletion qiita_pet/__init__.py
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# The full license is in the file LICENSE, distributed with this software.
# -----------------------------------------------------------------------------

__version__ = "2024.10"
__version__ = "2025.01"
2 changes: 1 addition & 1 deletion qiita_pet/handlers/api_proxy/__init__.py
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from .user import (user_jobs_get_req)
from .util import check_access, check_fp

__version__ = "2024.10"
__version__ = "2025.01"

__all__ = ['prep_template_summary_get_req', 'data_types_get_req',
'study_get_req', 'sample_template_filepaths_get_req',
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2 changes: 1 addition & 1 deletion qiita_ware/__init__.py
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# The full license is in the file LICENSE, distributed with this software.
# -----------------------------------------------------------------------------

__version__ = "2024.10"
__version__ = "2025.01"
2 changes: 1 addition & 1 deletion setup.py
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from setuptools import setup
from glob import glob

__version__ = "2024.10"
__version__ = "2025.01"


classes = """
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