Add dicom processing capability to PyALFE #49
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added 3 commits
July 1, 2024 14:51
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please run integration |
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please run integration |
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please run integration |
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Description
This PR introduces a capability to classify and convert dicom to NIfTI. The PR includes the related task, pipeline and a command added to main for processing dicom.
Related Issues
None
Motivation and Context
PyALFE pipeline requires the input images to be in NIfTI format and already classified based on sequence.
Raw images downloaded from PACS are in dicom format and the sequence (modality) needs to be detected from dicom
meta data. This requires the user to manually perform these task before running the pipeline. This PR added a command to automate that.
Test Plan
Added a unit test for the dicom processing task.
Reviewers
@btuan