Skip to content

version 3.3.0

Latest
Latest
Compare
Choose a tag to compare
@rnakato rnakato released this 04 Feb 08:51
v3.3.0
5a60dc7

2025.2.3: version 3.3.0

  • Added moscot in the shortcake_default environment
  • Added memento in the shortcake_default environment
  • Added scranPY in the shortcake_default environment
  • Moved decoupler, liana, sctriangulate from shortcake_default to a new environment decoupler-liana-sctriangulate to avoid version conflict
  • Moved Squidpy from shortcake_default to a new environment squidpy to avoid version conflict
  • Fixed an installation issue of kallisto|bustools (kb-python)

2025.1.15: version 3.2.0

  • Added SCENIC+ in the scenicplus environment
  • Added Squidpy in the shortcake_default environment
  • Added decoupler in the shortcake_default environment
  • In the shortcake_default environment,
    • Updated Python from 3.9 to 3.10
    • Updated scanpy from 1.9.8 to 1.10.4
    • Updated cellrank from 1.5.1 to 2.0.6
    • Updated pandas from 1.2.1 to 1.5.0
    • Updated scvelo from 0.2.5 to 0.3.1
    • Updated screcode from 0.2.5 to 1.0.0
Assets 2
Loading