Merge pull request #7 from roflmaostc/major_rewrite

Major rewrite

Project.toml

@@ -1,7 +1,7 @@
 name = "RadonKA"
 uuid = "86de8297-835b-47df-b249-c04e8db91db5"
 authors = ["Felix Wechsler (roflmaostc) <[email protected]>"]
-version = "0.2.1"
+version = "0.3"
 
 [deps]
 Atomix = "a9b6321e-bd34-4604-b9c9-b65b8de01458"

README.md

@@ -9,21 +9,22 @@ A simple yet sufficiently fast Radon and inverse Radon (iradon) transform implem
 
 # Quick Overview
 * [x] For 2D and 3D arrays 
-* [x] parallel `radon` and `iradon`
-* [x] arbitrary (2D) geometries can be specified with `ray_startpoints` and `ray_endpoints` 
-* [x] attenuated `radon` and `iradon` (see this [paper](https://iopscience.iop.org/article/10.1088/0266-5611/17/1/309/meta) as reference)
+* [x] parallel `radon` and `iradon` (`?RadonParallelCircle`)
+* [x] attenuated `radon` and `iradon` (see the parameter `μ`) and see this [paper](https://iopscience.iop.org/article/10.1088/0266-5611/17/1/309/meta) as reference)
+* [x] arbitrary 2D geometries where starting and endpoint of each ray can be specified (cone beam could be a special case if this) (`?RadonFlexibleCircle`)
 * [x] It is restricted to the incircle of radius `N ÷ 2 - 1` if the array has size `(N, N, N_z)`
 * [x] based on [KernelAbstractions.jl](https://github.com/JuliaGPU/KernelAbstractions.jl)
 * [x] tested on `CPU()` and `CUDABackend`
 * [x] registered adjoint rules for both `radon` and `iradon`
+* [x] high performance however not ultra high performance
+* [x] simple API
 
 # Installation
 Requires Julia at least 1.9
 ```julia
 julia> ]add RadonKA
 ```
 
-
 # Simple use
 ```julia
 using RadonKA, ImageShow, ImageIO, TestImages

docs/Manifest.toml

@@ -1,6 +1,6 @@
 # This file is machine-generated - editing it directly is not advised
 
-julia_version = "1.9.4"
+julia_version = "1.10.0"
 manifest_format = "2.0"
 project_hash = "eddb71d2ac352012abcf8111e85f5032b7826df9"
 
@@ -27,9 +27,9 @@ version = "0.4.4"
 
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 deps = ["LinearAlgebra", "Requires"]
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     [deps.Adapt.extensions]
@@ -52,25 +52,25 @@ version = "0.1.0"
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 [[deps.CEnum]]
-git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90"
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     [deps.ChainRulesCore.extensions]
     ChainRulesCoreSparseArraysExt = "SparseArrays"
 
 [[deps.Compat]]
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-git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d"
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@@ -79,7 +79,7 @@ weakdeps = ["Dates", "LinearAlgebra"]
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 deps = ["Artifacts", "Libdl"]
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+version = "1.0.5+1"
 
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@@ -93,9 +93,9 @@ version = "0.9.3"
 
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@@ -110,9 +110,9 @@ version = "2.5.0+0"
 
 [[deps.FFTW]]
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 [[deps.FFTW_jll]]
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@@ -131,27 +131,27 @@ version = "1.3.0"
 
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 [[deps.IndexFunArrays]]
 deps = ["ChainRulesCore", "LinearAlgebra"]
-git-tree-sha1 = "e66a2aeb6d5814015004080e5203dfff44d2856f"
+git-tree-sha1 = "6f78703c7a4ba06299cddd8694799c91de0157ac"
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-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "ad37c091f7d7daf900963171600d7c1c5c3ede32"
+deps = ["Artifacts", "JLLWrappers", "Libdl"]
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 deps = ["Markdown"]
@@ -171,9 +171,9 @@ version = "0.21.4"
 
 [[deps.KernelAbstractions]]
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-git-tree-sha1 = "b0737cbbe1c8da6f1139d1c23e35e7cea129c0af"
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+version = "0.9.16"
 
     [deps.KernelAbstractions.extensions]
     EnzymeExt = "EnzymeCore"
@@ -183,9 +183,9 @@ version = "0.9.13"
 
 [[deps.LLVM]]
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@@ -219,9 +219,14 @@ uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
 version = "8.4.0+0"
 
 [[deps.LibGit2]]
-deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
+deps = ["Base64", "LibGit2_jll", "NetworkOptions", "Printf", "SHA"]
 uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
 
+[[deps.LibGit2_jll]]
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+uuid = "e37daf67-58a4-590a-8e99-b0245dd2ffc5"
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+
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@@ -244,16 +249,16 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
 
 [[deps.MKL_jll]]
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-git-tree-sha1 = "eb006abbd7041c28e0d16260e50a24f8f9104913"
+deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl"]
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 deps = ["Markdown", "Random"]
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@@ -268,14 +273,14 @@ version = "0.1.2"
 [[deps.MbedTLS_jll]]
 deps = ["Artifacts", "Libdl"]
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+version = "2023.1.10"
 
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@@ -284,29 +289,29 @@ version = "1.2.0"
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 deps = ["Dates", "PrecompileTools", "UUIDs"]
-git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf"
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@@ -329,13 +334,13 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
 uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
 
 [[deps.RadonKA]]
-deps = ["Adapt", "Atomix", "FFTW", "IndexFunArrays", "KernelAbstractions"]
+deps = ["Atomix", "ChainRulesCore", "FFTW", "IndexFunArrays", "KernelAbstractions", "PrecompileTools"]
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@@ -368,17 +373,20 @@ uuid = "6462fe0b-24de-5631-8697-dd941f90decc"
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 deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"]
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     [deps.StaticArrays.extensions]
+    StaticArraysChainRulesCoreExt = "ChainRulesCore"
     StaticArraysStatisticsExt = "Statistics"
 
     [deps.StaticArrays.weakdeps]
+    ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
     Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 
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@@ -387,9 +395,9 @@ uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c"
 version = "1.4.2"
 
 [[deps.SuiteSparse_jll]]
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+deps = ["Artifacts", "Libdl", "libblastrampoline_jll"]
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@@ -426,12 +434,12 @@ version = "0.1.3"
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@@ -441,4 +449,4 @@ version = "1.52.0+1"
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