Rename Quasispecies to Intrahost.

russelllab · Jan 4, 2022 · 237257e · 237257e
1 parent d1f50b5
commit 237257e
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Showing 3 changed files with 7 additions and 7 deletions.
diff --git a/src/app.jsx b/src/app.jsx
@@ -61,7 +61,7 @@ function FASTALinks(props) {
       <Link to="/fasta-start" header="Start at a given sequence and site" />
       <Link to="/fasta-lowercase" header="Lower case alignment" />
       <Link to="/fasta-svg" header="SVG alignment" />
-      <Link to="/fasta-quasispecies" header="Quasispecies" />
+      <Link to="/fasta-intrahost" header="Intrahost variation" />
       <Link to="/fasta-sequence-bar" header="Sequence Bar Chart" />
       <Link to="/fasta-site-stacked-bar" header="Site Stacked Bar Chart" />
       <Link to="/fasta-ar" header="Artificial Recombination" />
@@ -131,7 +131,7 @@ class App extends Component {
           <Route path="/fasta-start" component={FASTA.StartAtSiteAndSequence} />
           <Route path="/fasta-lowercase" component={FASTA.Lowercase} />
           <Route path="/fasta-svg" component={FASTA.SVGAlignmentExample} />
-          <Route path="/fasta-quasispecies" component={FASTA.Quasispecies} />
+          <Route path="/fasta-intrahost" component={FASTA.Intrahost} />
           <Route
             path="/fasta-sequence-bar"
             component={FASTA.SequenceBarChart}

diff --git a/src/app/FASTA.jsx b/src/app/FASTA.jsx
@@ -15,7 +15,7 @@ import Highlight from "./FASTA/highlight.jsx";
 import SVGAlignmentExample from "./FASTA/svg_example.jsx";
 import StartAtSiteAndSequence from "./FASTA/start_at_site_and_sequence.jsx";
 import Lowercase from "./FASTA/lowercase.jsx";
-import Quasispecies from "./FASTA/quasispecies.jsx";
+import Intrahost from "./FASTA/intrahost.jsx";
 import SequenceBarChart from "./FASTA/sequence_bar_chart.jsx";
 import SiteStackedBarChart from "./FASTA/site_stacked_bar_chart.jsx";
 import ArtificialRecombination from "./FASTA/artificial_recombination.jsx";
@@ -193,7 +193,7 @@ export {
   StartAtSiteAndSequence,
   Lowercase,
   SVGAlignmentExample,
-  Quasispecies,
+  Intrahost,
   SequenceBarChart,
   SiteStackedBarChart,
   ArtificialRecombination,

diff --git a/src/app/FASTA/quasispecies.jsx → src/app/FASTA/intrahost.jsx b/src/app/FASTA/quasispecies.jsx → src/app/FASTA/intrahost.jsx
@@ -86,7 +86,7 @@ GTCACAATAAAGGTAGGAGGGCAACTAAAGGAAGCTCTATTAGATACAGGAGCAGAT `),
     return record;
   });
 
-function Quasispecies() {
+function Intrahost() {
   const site_size = 15,
     reference_width = 100,
     label_height = 60,
@@ -96,7 +96,7 @@ function Quasispecies() {
   return (
     <div>
       <div>
-        <h1>Quasispecies</h1>
+        <h1>Intrahost</h1>
         <Button
           label="Save as PNG"
           onClick={() =>
@@ -255,4 +255,4 @@ function Quasispecies() {
   );
 }
 
-export default Quasispecies;
+export default Intrahost;