update cran comments

cran-comments.md

@@ -1,15 +1,17 @@
 ## Minor Version Update 
-This is a hotfix minor update from v1.1.2 to v1.1.3. In this version I have:  
+This is a major version update to v2.0.0. In this version I have:  
 
-- Fixed parameter documentation in function help/manual that slipped through release (see News.md). I'm sorry this was missed in submission yesterday.  Parameter input changed substantially in v1.1.2 and therefore accurate documentation is required with hotfix instead of waiting until next release. 
+- Added a number of new functions, added new function parameters, and fixed bugs (see News.md).  
+- Ensured compatibility with major version of Seurat package.  
+- Fixed in example code causing current CRAN check errors with current package version (v1.1.3).
 
 
 ## R CMD check results
 
 0 errors | 0 warnings | 1 notes
 
 ### Test environments  
-- Run locally, R4.1.2, Platform: x86_64-apple-darwin17.0 (64-bit) with `devtools:check()`.  
+- Run locally, R4.3.1, Platform: x86_64-apple-darwin17.0 (64-bit) with `devtools:check()`.  
 - Also run via GitHub Actions via `usethis::use_github_action_check_standard`
     - macos-latest (release), windows-latest (release), ubuntu-latest (devel), ubuntu-latest (release), ubuntu-latest (oldrel-1).  
 
@@ -20,4 +22,9 @@ This is a hotfix minor update from v1.1.2 to v1.1.3. In this version I have:
   use conditionally.  
     - I have worked to move/remove as many IMPORTS to SUGGESTS as possible.  This package aims to simplify a number of different
     visualizations/code tasks in scRNA-seq analysis and as such does have diverse array of dependencies.  I will monitor
-    to ensure package functionality.
+    to ensure package functionality.  
+2. Suggests or Enhances not in mainstream repositories:
+     rliger  
+     - I hope this issue to be fixed soon as the maintainers have assigned team member to fix issue
+     (https://github.com/welch-lab/liger/issues/293).  However, in the interim this loss will not effect package global package
+     functionality.  Those looking for rliger functionality can still easily download versions from CRAN archive and GitHub.