Small fixes

satijalab · Aug 11, 2021 · b8a546e · b8a546e
1 parent d6809fe
commit b8a546e
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/human_kidney/reference/config.json b/human_kidney/reference/config.json
@@ -9,7 +9,7 @@
   "Azimuth.app.default_metadata": "annotation.l2",
   "Azimuth.map.ndims": 100,
   "Azimuth.app.welcomebox": "div(\n    h3(HTML(\"Please upload a dataset to map to our <b>human kidney</b> reference\")),\n    \"Upload a counts matrix from a single-cell or single-nucleus RNA-seq dataset of human kidney in one\n        of the following formats: hdf5, rds, h5ad, h5seurat. For testing, we also provide a demo dataset of 10,928 human kidney cells from \",a(\"Stewart et al, 2019\", href=\"https://science.sciencemag.org/content/365/6460/1461\", target=\"_blank\"),\" (10x Genomics v2; scRNAseq), which is loaded automatically with the 'Load demo dataset' button or available for download \",\n    a(\"here.\",\n      href=\"https://www.kidneycellatlas.org/\", target=\"blank\"),\n    width = 12\n  )",
-  "Azimuth.app.refdescriptor": "<div class='refdescriptor'><br>This reference uses data from <a href='https://www.biorxiv.org/content/10.1101/2021.07.28.454201v1.full' target='blank'>Lake et al. 2021</a>, and consists of 64,693 kidney cells (10x Genomics snRNA-seq) generated by investigators in the Human Biomolecular Atlas Program (HuBMAP) and the Kidney Precision Medicine Project (KPMP). The dataset represents 21 samples across 13 patient donors. Samples were derived from nephrectomy, biopsy, or deceased donor tissue, spanning three anatomical regions: medulla, cortex and papilla. </div>",
+  "Azimuth.app.refdescriptor": "<div class='refdescriptor'><br>This reference uses data from <a href='https://www.biorxiv.org/content/10.1101/2021.07.28.454201v1.full' target='blank'>Lake et al. 2021</a>, and consists of 64,693 kidney cells (10x Genomics snRNA-seq) from healthy reference states generated by investigators in the Human Biomolecular Atlas Program (HuBMAP) and the Kidney Precision Medicine Project (KPMP). The dataset represents 21 samples across 13 patient donors. Samples were derived from nephrectomy, biopsy, or deceased donor tissue, spanning three anatomical regions: medulla, cortex and papilla. </div>",
   "shiny.maxRequestSize": 1048576000,
   "Azimuth.app.do_adt": "FALSE"
 }
diff --git a/human_kidney/scripts/export.R b/human_kidney/scripts/export.R
@@ -26,7 +26,7 @@ ref <- AzimuthReference(
   refDR = 'pca',
   metadata = c('annotation.l3', 'annotation.l2', 'annotation.l1'),
   dims = 1:100,
-  reference.version = "1.0.0"
+  reference.version = "1.0.1"
 )
 
 saveRDS(object = ref, file = args[2])