Code

Release/5.0.2#205

Code

Merged

dcollins15 merged 57 commits intomastersatijalab/seurat-object:masterfrom release/5.0.2satijalab/seurat-object:release/5.0.2Copy head branch name to clipboardMay 8, 2024

+353-158

Commits

Commits on Dec 20, 2023

• Update maintainer and package URLs

  Show description for 7955bda
  mojaveazure

  committed
  7955bda

  Copy full SHA for 7955bda

• Minor fix

  mojaveazure

  committed
  5a2bc63

  Copy full SHA for 5a2bc63

Commits on Dec 21, 2023

• Add ORCID

  mojaveazure

  committed
  dbe367c

  Copy full SHA for dbe367c

Commits on Dec 22, 2023

• Merge pull request #174 from satijalab/feat/maintainer

  Show description for bbc4cff
  mojaveazure

  authored
  bbc4cff

  Copy full SHA for bbc4cff

Commits on Jan 5, 2024

• Adjust imports and reexports from Matrix

  Show description for 1427775
  mojaveazure

  committed
  1427775

  Copy full SHA for 1427775

• Update pin for Matrix

  mojaveazure

  committed
  174cda3

  Copy full SHA for 174cda3

Commits on Jan 8, 2024

• Merge pull request #176 from satijalab/feat/matrix-import-export

  Show description for a2ee340
  mojaveazure

  authored
  a2ee340

  Copy full SHA for a2ee340

Commits on Jan 9, 2024

• Fix reexport of %||%

  Show description for a0c75fd
  mojaveazure

  committed
  a0c75fd

  Copy full SHA for a0c75fd

Commits on Jan 17, 2024

• Bump develop version

  Show description for bad954e
  mojaveazure

  committed
  bad954e

  Copy full SHA for bad954e

• Merge pull request #178 from satijalab/fix/set-if-null

  Show description for 64a9f57
  mojaveazure

  authored
  64a9f57

  Copy full SHA for 64a9f57

• Fixes error in UpdateSeuratObject due to missing global slot.

  

  ddiez

  authored and

  mojaveazure

  committed
  89bf440

  Copy full SHA for 89bf440

• Updates to keys

  Show description for 63ecbc4
  mojaveazure

  committed
  63ecbc4

  Copy full SHA for 63ecbc4

• Updates to keys

  Show description for a6c8fc0
  mojaveazure

  committed
  a6c8fc0

  Copy full SHA for a6c8fc0

Commits on Jan 19, 2024

• Merge branch 'feat/key-updates' of github.com:satijalab/seurat-object into feat/key-updates

  mojaveazure

  committed
  be0bb06

  Copy full SHA for be0bb06

• Update changelog

  Show description for 01d9659
  mojaveazure

  committed
  01d9659

  Copy full SHA for 01d9659

• Merge pull request #180 from satijalab/feat/key-updates

  Show description for ee82ea7
  mojaveazure

  authored
  ee82ea7

  Copy full SHA for ee82ea7

Commits on Feb 15, 2024

• Merge branch 'develop' into fix_UpdateSeuratObject

  mojaveazure

  authored
  3b789c2

  Copy full SHA for 3b789c2

Commits on Feb 16, 2024

• Update changelog

  Show description for e3dc827
  mojaveazure

  committed
  e3dc827

  Copy full SHA for e3dc827

• Merge pull request #182 from ddiez/fix_UpdateSeuratObject

  Show description for 87412bb
  mojaveazure

  authored
  87412bb

  Copy full SHA for 87412bb

Commits on Mar 7, 2024

• Add ... to Radius generic

  dcollins15

  committed
  b3d61a8

  Copy full SHA for b3d61a8

Commits on Mar 20, 2024

• Update docs

  dcollins15

  committed
  d6455e6

  Copy full SHA for d6455e6

• Bump version

  dcollins15

  committed
  eb4a02d

  Copy full SHA for eb4a02d

• Update NEWS

  dcollins15

  committed
  6f4442f

  Copy full SHA for 6f4442f

Commits on Mar 22, 2024

• Add ... to Radius.SpatialImage

  dcollins15

  committed
  22af7b4

  Copy full SHA for 22af7b4

• Add ... to Radius.Centroids

  dcollins15

  committed
  47e110e

  Copy full SHA for 47e110e

• Update docs

  dcollins15

  committed
  e142146

  Copy full SHA for e142146

Commits on Mar 24, 2024

• Merge pull request #190 from satijalab/feat/radius_params

  Show description for f683ac7
  dcollins15

  authored
  f683ac7

  Copy full SHA for f683ac7

• Cleanup initialize.FOV

  dcollins15

  committed
  8bcef10

  Copy full SHA for 8bcef10

• Bump version

  dcollins15

  committed
  df7dee3

  Copy full SHA for df7dee3

• Merge pull request #192 from satijalab/fix/cleanup_initialize_fov

  Show description for ee5ea0c
  dcollins15

  authored
  ee5ea0c

  Copy full SHA for ee5ea0c

Commits on Mar 29, 2024

• Bug fix in PolyVtx()

  Show description for fa37bd4
  mojaveazure

  committed
  fa37bd4

  Copy full SHA for fa37bd4

Commits on Apr 3, 2024

• Update changelog

  Show description for c2b5032
  mojaveazure

  committed
  c2b5032

  Copy full SHA for c2b5032

• Merge pull request #194 from satijalab/fix/PolyVtx

  Show description for 7bb1759
  mojaveazure

  authored
  7bb1759

  Copy full SHA for 7bb1759

Commits on Apr 15, 2024

• move feature-level metadata subsetting

  Gesmira

  committed
  308bd20

  Copy full SHA for 308bd20

• bump version

  Gesmira

  committed
  7625fec

  Copy full SHA for 7625fec

Commits on Apr 16, 2024

• Update NEWS.md

  Show description for bad9626
  

  Gesmira

  and

  mojaveazure

  authored
  bad9626

  Copy full SHA for bad9626

• Merge pull request #200 from satijalab/fix/subset_feat

  Show description for 0218527
  Gesmira

  authored
  0218527

  Copy full SHA for 0218527

Commits on May 2, 2024

• Use packageVersion("SeuratObject") in UpdateSeuratObject()

  Show description for 4c0a494
  

  mojaveazure

  authored and

  dcollins15

  committed
  4c0a494

  Copy full SHA for 4c0a494

Commits on May 3, 2024

• Tidy NEWS

  dcollins15

  committed
  169cd32

  Copy full SHA for 169cd32

• Update NEWS

  dcollins15

  committed
  c813bf1

  Copy full SHA for c813bf1

• Bump version

  dcollins15

  committed
  37f2e5e

  Copy full SHA for 37f2e5e

• Merge pull request #199 from satijalab/fix/update-seurat-object

  Show description for ed0fb40
  dcollins15

  authored
  ed0fb40

  Copy full SHA for ed0fb40

• Add warning if layer is absent from assay

  Show description for 16dd7d5
  

  maxim-h

  authored and

  mojaveazure

  committed
  16dd7d5

  Copy full SHA for 16dd7d5

• Minor style edits

  mojaveazure

  committed
  cf74503

  Copy full SHA for cf74503

• Update changelog

  Show description for 3d3c6b9
  mojaveazure

  committed
  3d3c6b9

  Copy full SHA for 3d3c6b9

• Merge pull request #189 from maxim-h/patch-1

  Show description for ceafa1e
  mojaveazure

  authored
  ceafa1e

  Copy full SHA for ceafa1e

• Fixup subset for multi-image Seurat instances

  dcollins15

  committed
  4ebb728

  Copy full SHA for 4ebb728

• Update NEWS

  dcollins15

  committed
  d08f3b2

  Copy full SHA for d08f3b2

• Bump version

  dcollins15

  committed
  71fff33

  Copy full SHA for 71fff33

Commits on May 4, 2024

• Merge pull request #204 from satijalab/fix/image_subset

  Show description for ddd6100
  dcollins15

  authored
  ddd6100

  Copy full SHA for ddd6100

Commits on May 5, 2024

• Update docstring for Radius generic

  dcollins15

  committed
  4e1eef2

  Copy full SHA for 4e1eef2

• Update NEWS

  dcollins15

  committed
  863eb39

  Copy full SHA for 863eb39

• Update docs

  dcollins15

  committed
  85a41dc

  Copy full SHA for 85a41dc

• Bump version

  dcollins15

  committed
  6184784

  Copy full SHA for 6184784

Commits on May 6, 2024

• Update cran-comments

  dcollins15

  committed
  4d9de17

  Copy full SHA for 4d9de17

Commits on May 7, 2024

• Fixup cran-comments.md

  dcollins15

  committed
  098fcfe

  Copy full SHA for 098fcfe

• Fixup cran-comments... again

  dcollins15

  committed
  6be58e1

  Copy full SHA for 6be58e1