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Fix min-deps hatch config #1807

Merged
merged 3 commits into from
Dec 19, 2024
Merged

Fix min-deps hatch config #1807

merged 3 commits into from
Dec 19, 2024

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flying-sheep
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@flying-sheep flying-sheep commented Dec 19, 2024

Port of scverse/scanpy#3337 and scverse/scanpy#3367 to anndata. Allows to actually use

hatch test -i deps=min

Content of min-deps.py is identical as scanpy’s

This bumps a few broken versions and changes the constraints

  • scanpy 1.9.8 instead of 1.10.0rc1 since 1.9.8 still has pandas 1.4 compat, moved into the test deps
  • numba 0.56 since older ones lead to build issues

@flying-sheep flying-sheep changed the title Fix min-deps job Fix min-deps hatch config Dec 19, 2024
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codecov bot commented Dec 19, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 84.59%. Comparing base (775bc0e) to head (497428f).
Report is 1 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #1807      +/-   ##
==========================================
- Coverage   87.06%   84.59%   -2.48%     
==========================================
  Files          40       40              
  Lines        6101     6101              
==========================================
- Hits         5312     5161     -151     
- Misses        789      940     +151     

see 8 files with indirect coverage changes

@flying-sheep flying-sheep merged commit ecdcc74 into main Dec 19, 2024
17 of 19 checks passed
@flying-sheep flying-sheep deleted the pa/min-tests branch December 19, 2024 14:09
meeseeksmachine pushed a commit to meeseeksmachine/anndata that referenced this pull request Dec 19, 2024
flying-sheep added a commit that referenced this pull request Dec 19, 2024
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