Merge pull request #10 from rmillikin/master

sum feature group separate protein variable
smith-chem-wisc · Jul 19, 2017 · 753489a · 753489a
2 parents 774e2c5 + 57b00e7
commit 753489a
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/FlashLFQ/FlashLFQSummedFeatureGroup.cs b/FlashLFQ/FlashLFQSummedFeatureGroup.cs
@@ -5,13 +5,15 @@ namespace FlashLFQ
     public class FlashLFQSummedFeatureGroup
     {
         public readonly string BaseSequence;
+        public readonly string ProteinGroup;
         public readonly double[] intensitiesByFile;
         public readonly string[] detectionType;
         public static string[] files;
 
-        public FlashLFQSummedFeatureGroup(string baseSeq, double[] intensitiesByFile, string[] detectionType)
+        public FlashLFQSummedFeatureGroup(string baseSeq, string proteinGroup, double[] intensitiesByFile, string[] detectionType)
         {
             BaseSequence = baseSeq;
+            ProteinGroup = proteinGroup;
             this.intensitiesByFile = intensitiesByFile;
             this.detectionType = detectionType;
         }
@@ -36,6 +38,7 @@ public override string ToString()
             StringBuilder sb = new StringBuilder();
 
             sb.Append("" + BaseSequence + '\t');
+            sb.Append("" + ProteinGroup + '\t');
             sb.Append(string.Join("\t", intensitiesByFile) + '\t');
             sb.Append(string.Join("\t", detectionType));
 

diff --git a/FlashLFQ/FlashLfqEngine.cs b/FlashLFQ/FlashLfqEngine.cs
@@ -1372,7 +1372,7 @@ public List<FlashLFQSummedFeatureGroup> SumFeatures(IEnumerable<FlashLFQFeature>
                         identificationType[i] = "";
                 }
 
-                returnList.Add(new FlashLFQSummedFeatureGroup(sequence.Key + "\t" + sequence.Value.First().identifyingScans.First().proteinGroup.proteinGroupName, intensitiesByFile, identificationType));
+                returnList.Add(new FlashLFQSummedFeatureGroup(sequence.Key, sequence.Value.First().identifyingScans.First().proteinGroup.proteinGroupName, intensitiesByFile, identificationType));
             }
 
             return returnList.OrderBy(p => p.BaseSequence).ToList();