fix for windows test #77

	name: R

	on:
	push:
	branches: [ "testing-actions" ]
	pull_request:
	branches: [ "main" ]

	permissions:
	contents: write

	jobs:
	build:
	strategy:
	matrix:
	os: [macos-latest, ubuntu-latest, windows-latest]
	r-version: ['4.3.3']
	runs-on: ${{ matrix.os }}

	steps:
	- uses: actions/checkout@v3

	- name: Set up R ${{ matrix.r-version }}
	uses: r-lib/actions/setup-r@v2
	with:
	r-version: ${{ matrix.r-version }}

	- name: Install system dependencies
	if: runner.os == 'Linux'
	run: \|
	sudo apt-get update
	sudo apt-get install -y libcurl4-openssl-dev libssl-dev libxml2-dev
	shell: bash

	- name: Install dependencies
	uses: r-lib/actions/setup-r-dependencies@v2
	with:
	use-public-rspm: true
	extra-packages: any::rcmdcheck, any::remotes, any::pandoc, any::gh

	- name: Install Bioconductor BiocCheck
	run: \|
	if (Sys.info()[['sysname']] == 'Windows') install.packages('Rtools')
	install.packages("BiocManager")
	BiocManager::install("BiocCheck")
	shell: Rscript {0}

	- name: Install lme4
	run: \|
	if (Sys.info()[['sysname']] == 'Windows') {
	install.packages("lme4", type = "binary")
	} else {
	install.packages("lme4", type = "source")
	}
	shell: Rscript {0}

	- name: Install pandoc
	uses: r-lib/actions/setup-pandoc@v2

	- name: Normalize line endings
	run: \|
	git config --global core.autocrlf false

	- name: Tests
	uses: r-lib/actions/check-r-package@v2
	with:
	upload-snapshots: true
	error-on: '"error"'
	build_args: '"--no-build-vignettes"'
	args: 'c("--no-manual", "--as-cran", "--no-vignettes")'

	- name: Run BiocCheck
	run: \|
	Rscript -e 'BiocCheck::BiocCheck(".")'

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