mv summary function to scripts & replot according to HY's comment #61
Annotations
29 warnings
Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/gp.md:7-34
```@example gp
using Random
using Plots
using LaTeXStrings
using MonotoneDecomposition: sigmoid, gp
function plot_functions()
n = 100
Random.seed!(1)
x = sort(rand(n)) * 2 .- 1
figsize = (400, 400)
fig1 = plot(x, x .^ 3, label = L"x^3", ls = :solid, size = figsize, legend = :top)
plot!(fig1, x, x .^ 2, label = L"x^2", ls = :dash)
plot!(fig1, x, exp.(x) .- 1, label = L"\exp(x)-1", ls = :dot)
plot!(fig1, x, sigmoid.(x), label = L"1/(1+\exp(-5x))", ls = :dashdot)
plot!(fig1, x, sin.(2π * x), label = L"\sin(2\pi x)", ls = :dashdotdot)
# plot(x, gp(x, kernel = "SE_0.1"))
fig2 = plot(x, gp(x, kernel = "SE_1"), label = "SE_1", ls = :solid, size = figsize, legend = :topright)
plot!(fig2, x, gp(x, kernel = "SE_0.1"), label = "SE_0.1", ls = :dash)
plot!(fig2, x, gp(x, kernel = "SE_0.5"), label = "SE_0.5", ls = :dot)
fig3 = plot(x, gp(x, kernel = "Mat12_1"), label = "Mat12", ls = :solid, size = figsize, legend = :topleft)
plot!(fig3, x, gp(x, kernel = "Mat32_1"), label = "Mat32", ls = :dash)
plot!(fig3, x, gp(x, kernel = "Mat52_1"), label = "Mat52", ls = :dot)
plot!(fig3, x, gp(x, kernel = "RQ_1_0.5"), label = "RQ", ls = :dashdot)
plot!(fig3, x, gp(x, kernel = "Periodic_1_1"), ls = :dashdotdot, label = "Periodic")
return plot(fig1, fig2, fig3, layout = (1, 3), size = (3*figsize[1], figsize[2]) )
# savefig("~/PGitHub/overleaf/MonoDecomp/figs/funcs.pdf") # saved for paper
end
```
value =
ArgumentError: Package LaTeXStrings not found in current path.
- Run `import Pkg; Pkg.add("LaTeXStrings")` to install the LaTeXStrings package.
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Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/gp.md:12-14
```@example gp
plot_functions()
```
value = UndefVarError: plot_functions not defined
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Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/md_SE.md:26-31
```@example md_SE
ss = 10.0 .^ (-6:0.1:0)
D, μmin, μs, errs, σerrs, yhat, yhatnew =
cv_mono_decomp_cs(x, y, ss = ss, fixJ = true, x0 = x0);
nothing #hide
```
value = BoundsError: attempt to access Tuple{MonotoneDecomposition.MonoDecomp{Float64}, Float64, Matrix{Float64}, Matrix{Float64}} at index [5]
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Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/md_SE.md:35-37
```@example md_SE
plot([x, y], [x0, y0], D, yhatnew, prefix_title = "SE (ℓ = 1, σ = 0.5): ")
```
value = UndefVarError: yhatnew not defined
|
Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/md_SE.md:41-43
```@example md_SE
cvplot(errs, σerrs, 1.0 * D.workspace.J:D.workspace.J, μs)
```
value = UndefVarError: σerrs not defined
|
Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/md_SE.md:47-53
```@example md_SE
Js = 4:50
D, μmin, μs, errs, σerrs =
cv_mono_decomp_cs(x, y, ss = ss, fixJ = false, x0 = x0, Js = Js);
J, yhat, yhatnew = cv_cubic_spline(x, y, x0, Js = Js)
plot([x, y], [x0, y0], D, yhatnew, prefix_title = "SE (ℓ = 1, σ = 0.5): ")
```
value = BoundsError: attempt to access Tuple{MonotoneDecomposition.MonoDecomp{Float64}, Float64, Matrix{Float64}, Matrix{Float64}} at index [5]
|
Documentation (1.8.4, 4.2.1):
../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
failed to run `@example` block in src/examples/md_SE.md:57-59
```@example md_SE
cvplot(errs, σerrs, Js * 1.0, ss)
```
value = UndefVarError: σerrs not defined
|
Documentation (1.8.4, 4.2.1)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Documentation (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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Documentation (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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Documentation (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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Documentation (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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Documentation (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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Documentation (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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Documentation (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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Documentation (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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Documentation (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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Documentation (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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test (1.8.4, 4.2.1)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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test (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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test (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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test (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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test (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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test (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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test (1.8.4, 4.2.1)
no DISPLAY variable so Tk is not available
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test (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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test (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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test (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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test (1.8.4, 4.2.1)
Fortran 2018 deleted feature: Arithmetic IF statement at (1)
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