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tdayris committed Jun 10, 2024
1 parent bdabfec commit 6d35a62
Showing 1 changed file with 5 additions and 4 deletions.
9 changes: 5 additions & 4 deletions workflow/rules/common.smk
Original file line number Diff line number Diff line change
Expand Up @@ -401,11 +401,12 @@ def get_fair_bowtie2_mapping_target(
Dictionnary of expected output files
"""
# Include requirements of previous pipelines
fair_genome_indexer_targets: dict[str, list[str] | str] = (
fair_genome_indexer.get_fair_genome_indexer_target(
wildcards=wildcards, genomes=genomes, samples=samples
)
fair_genome_indexer_targets: dict[
str, list[str] | str
] = fair_genome_indexer.get_fair_genome_indexer_target(
wildcards=wildcards, genomes=genomes, samples=samples
)

fair_fastqc_multiqc_targets: dict[str, list[str]] = dict(
fair_fastqc_multiqc.rules.fair_fastqc_multiqc_target.input
)
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