4.4.1

Features:

• Use of wrapper's version of Sex.DetERRmine
• Snakemake-wrappers update to 5.5.0
• Tasks update

Fix:

• Sex.DetERRmine used only on human and mice

4.4.0

Features:

• Snakemake-wrappers update to 5.3.0
• MTNucRatioCalculator added to QC
• Easy snakemake-wrappers update
• Easy conda envs update
• New testing pipeline with additional format checks

Doc:

• Citation cff file added

4.3.1

Features:

• Snakemake-wrappers up to 4.6.0

Documentation:

• Update in the configuration section

4.2.0

Features:

• Samtools idxstats included

Fixes:

• Deeptools alignment sieve producing non position-sorted bams

4.1.3

Features:

• Reduce fastp threads

4.1.2

Features:

• Fastp threads reduced

4.1.1

Features:

• Allow local snakemake wrappers
• Allow local modules

4.1.0

Features:

• Fastp output compressed

4.0.0

Features:

• Deeptools alignment sieve (on params/make_sieve set to true)
• snakemake_wrappers up to 3.13.7

3.5.2

Features:

• fair_genome_indexer up to 3.8.1
• Memory / Time reservations