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tidyverse · Dec 5, 2024 · bdaaec5 · bdaaec5
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diff --git a/documentation.html b/documentation.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.57">
+<meta name="generator" content="quarto-1.6.39">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -71,10 +71,10 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-5756323b8702476936633381e2142f88.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
 <script id="quarto-search-options" type="application/json">{
   "location": "sidebar",
   "copy-button": false,
@@ -519,8 +519,6 @@ <h2 data-number="7.9" class="anchored" data-anchor-id="internal-functions"><span
   });
   clipboard.on('success', onCopySuccess);
   if (window.document.getElementById('quarto-embedded-source-code-modal')) {
-    // For code content inside modals, clipBoardJS needs to be initialized with a container option
-    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
     const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
       text: getTextToCopy,
       container: window.document.getElementById('quarto-embedded-source-code-modal')
@@ -631,7 +629,6 @@ <h2 data-number="7.9" class="anchored" data-anchor-id="internal-functions"><span
       if (window.Quarto?.typesetMath) {
         window.Quarto.typesetMath(note);
       }
-      // TODO in 1.5, we should make sure this works without a callout special case
       if (note.classList.contains("callout")) {
         return note.outerHTML;
       } else {

diff --git a/errors.html b/errors.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.57">
+<meta name="generator" content="quarto-1.6.39">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -71,10 +71,10 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-5756323b8702476936633381e2142f88.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
 <script id="quarto-search-options" type="application/json">{
   "location": "sidebar",
   "copy-button": false,
@@ -616,8 +616,6 @@ <h2 data-number="9.7" class="anchored" data-anchor-id="localisation"><span class
   });
   clipboard.on('success', onCopySuccess);
   if (window.document.getElementById('quarto-embedded-source-code-modal')) {
-    // For code content inside modals, clipBoardJS needs to be initialized with a container option
-    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
     const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
       text: getTextToCopy,
       container: window.document.getElementById('quarto-embedded-source-code-modal')
@@ -728,7 +726,6 @@ <h2 data-number="9.7" class="anchored" data-anchor-id="localisation"><span class
       if (window.Quarto?.typesetMath) {
         window.Quarto.typesetMath(note);
       }
-      // TODO in 1.5, we should make sure this works without a callout special case
       if (note.classList.contains("callout")) {
         return note.outerHTML;
       } else {

diff --git a/files.html b/files.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.57">
+<meta name="generator" content="quarto-1.6.39">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -71,10 +71,10 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-5756323b8702476936633381e2142f88.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
 <script id="quarto-search-options" type="application/json">{
   "location": "sidebar",
   "copy-button": false,
@@ -407,8 +407,6 @@ <h2 data-number="1.3" class="anchored" data-anchor-id="internal-structure"><span
   });
   clipboard.on('success', onCopySuccess);
   if (window.document.getElementById('quarto-embedded-source-code-modal')) {
-    // For code content inside modals, clipBoardJS needs to be initialized with a container option
-    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
     const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
       text: getTextToCopy,
       container: window.document.getElementById('quarto-embedded-source-code-modal')
@@ -519,7 +517,6 @@ <h2 data-number="1.3" class="anchored" data-anchor-id="internal-structure"><span
       if (window.Quarto?.typesetMath) {
         window.Quarto.typesetMath(note);
       }
-      // TODO in 1.5, we should make sure this works without a callout special case
       if (note.classList.contains("callout")) {
         return note.outerHTML;
       } else {

diff --git a/functions.html b/functions.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.57">
+<meta name="generator" content="quarto-1.6.39">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -71,10 +71,10 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-5756323b8702476936633381e2142f88.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
 <script id="quarto-search-options" type="application/json">{
   "location": "sidebar",
   "copy-button": false,
@@ -292,7 +292,7 @@ <h1 class="title"><span class="chapter-number">3</span>&nbsp; <span class="chapt
 
 <section id="naming" class="level2" data-number="3.1">
 <h2 data-number="3.1" class="anchored" data-anchor-id="naming"><span class="header-section-number">3.1</span> Naming</h2>
-<p>As well as following the general advice for [object names], strive to use verbs for function names:</p>
+<p>As well as following the general advice for object names in <a href="syntax.html#sec-objectnames" class="quarto-xref"><span>Section 2.1</span></a>, strive to use verbs for function names:</p>
 <div class="cell">
 <div class="sourceCode cell-code" id="cb1"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="co"># Good</span></span>
 <span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="fu">add_row</span>()</span>
@@ -563,8 +563,6 @@ <h2 data-number="3.6" class="anchored" data-anchor-id="comments"><span class="he
   });
   clipboard.on('success', onCopySuccess);
   if (window.document.getElementById('quarto-embedded-source-code-modal')) {
-    // For code content inside modals, clipBoardJS needs to be initialized with a container option
-    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
     const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
       text: getTextToCopy,
       container: window.document.getElementById('quarto-embedded-source-code-modal')
@@ -675,7 +673,6 @@ <h2 data-number="3.6" class="anchored" data-anchor-id="comments"><span class="he
       if (window.Quarto?.typesetMath) {
         window.Quarto.typesetMath(note);
       }
-      // TODO in 1.5, we should make sure this works without a callout special case
       if (note.classList.contains("callout")) {
         return note.outerHTML;
       } else {

diff --git a/ggplot2.html b/ggplot2.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.57">
+<meta name="generator" content="quarto-1.6.39">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -71,10 +71,10 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-5756323b8702476936633381e2142f88.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
 <script id="quarto-search-options" type="application/json">{
   "location": "sidebar",
   "copy-button": false,
@@ -319,18 +319,20 @@ <h2 data-number="5.3" class="anchored" data-anchor-id="long-lines"><span class="
 <p>If the arguments to a ggplot2 layer don’t all fit on one line, put each argument on its own line and indent:</p>
 <div class="cell">
 <div class="sourceCode cell-code" id="cb2"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb2-1"><a href="#cb2-1" aria-hidden="true" tabindex="-1"></a><span class="co"># Good</span></span>
-<span id="cb2-2"><a href="#cb2-2" aria-hidden="true" tabindex="-1"></a><span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> Sepal.Width, <span class="at">y =</span> Sepal.Length, <span class="at">color =</span> Species)) <span class="sc">+</span></span>
-<span id="cb2-3"><a href="#cb2-3" aria-hidden="true" tabindex="-1"></a>  <span class="fu">geom_point</span>() <span class="sc">+</span></span>
-<span id="cb2-4"><a href="#cb2-4" aria-hidden="true" tabindex="-1"></a>  <span class="fu">labs</span>(</span>
-<span id="cb2-5"><a href="#cb2-5" aria-hidden="true" tabindex="-1"></a>    <span class="at">x =</span> <span class="st">"Sepal width, in cm"</span>,</span>
-<span id="cb2-6"><a href="#cb2-6" aria-hidden="true" tabindex="-1"></a>    <span class="at">y =</span> <span class="st">"Sepal length, in cm"</span>,</span>
-<span id="cb2-7"><a href="#cb2-7" aria-hidden="true" tabindex="-1"></a>    <span class="at">title =</span> <span class="st">"Sepal length vs. width of irises"</span></span>
-<span id="cb2-8"><a href="#cb2-8" aria-hidden="true" tabindex="-1"></a>  )</span>
-<span id="cb2-9"><a href="#cb2-9" aria-hidden="true" tabindex="-1"></a></span>
-<span id="cb2-10"><a href="#cb2-10" aria-hidden="true" tabindex="-1"></a><span class="co"># Bad</span></span>
-<span id="cb2-11"><a href="#cb2-11" aria-hidden="true" tabindex="-1"></a><span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> Sepal.Width, <span class="at">y =</span> Sepal.Length, <span class="at">color =</span> Species)) <span class="sc">+</span></span>
-<span id="cb2-12"><a href="#cb2-12" aria-hidden="true" tabindex="-1"></a>  <span class="fu">geom_point</span>() <span class="sc">+</span></span>
-<span id="cb2-13"><a href="#cb2-13" aria-hidden="true" tabindex="-1"></a>  <span class="fu">labs</span>(<span class="at">x =</span> <span class="st">"Sepal width, in cm"</span>, <span class="at">y =</span> <span class="st">"Sepal length, in cm"</span>, <span class="at">title =</span> <span class="st">"Sepal length vs. width of irises"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
+<span id="cb2-2"><a href="#cb2-2" aria-hidden="true" tabindex="-1"></a>iris <span class="sc">|&gt;</span></span>
+<span id="cb2-3"><a href="#cb2-3" aria-hidden="true" tabindex="-1"></a>  <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> Sepal.Width, <span class="at">y =</span> Sepal.Length, <span class="at">color =</span> Species)) <span class="sc">+</span></span>
+<span id="cb2-4"><a href="#cb2-4" aria-hidden="true" tabindex="-1"></a>  <span class="fu">geom_point</span>() <span class="sc">+</span></span>
+<span id="cb2-5"><a href="#cb2-5" aria-hidden="true" tabindex="-1"></a>  <span class="fu">labs</span>(</span>
+<span id="cb2-6"><a href="#cb2-6" aria-hidden="true" tabindex="-1"></a>    <span class="at">x =</span> <span class="st">"Sepal width, in cm"</span>,</span>
+<span id="cb2-7"><a href="#cb2-7" aria-hidden="true" tabindex="-1"></a>    <span class="at">y =</span> <span class="st">"Sepal length, in cm"</span>,</span>
+<span id="cb2-8"><a href="#cb2-8" aria-hidden="true" tabindex="-1"></a>    <span class="at">title =</span> <span class="st">"Sepal length vs. width of irises"</span></span>
+<span id="cb2-9"><a href="#cb2-9" aria-hidden="true" tabindex="-1"></a>  )</span>
+<span id="cb2-10"><a href="#cb2-10" aria-hidden="true" tabindex="-1"></a></span>
+<span id="cb2-11"><a href="#cb2-11" aria-hidden="true" tabindex="-1"></a><span class="co"># Bad</span></span>
+<span id="cb2-12"><a href="#cb2-12" aria-hidden="true" tabindex="-1"></a>iris <span class="sc">|&gt;</span></span>
+<span id="cb2-13"><a href="#cb2-13" aria-hidden="true" tabindex="-1"></a>  <span class="fu">ggplot</span>(<span class="fu">aes</span>(<span class="at">x =</span> Sepal.Width, <span class="at">y =</span> Sepal.Length, <span class="at">color =</span> Species)) <span class="sc">+</span></span>
+<span id="cb2-14"><a href="#cb2-14" aria-hidden="true" tabindex="-1"></a>  <span class="fu">geom_point</span>() <span class="sc">+</span></span>
+<span id="cb2-15"><a href="#cb2-15" aria-hidden="true" tabindex="-1"></a>  <span class="fu">labs</span>(<span class="at">x =</span> <span class="st">"Sepal width, in cm"</span>, <span class="at">y =</span> <span class="st">"Sepal length, in cm"</span>, <span class="at">title =</span> <span class="st">"Sepal length vs. width of irises"</span>)</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 </div>
 <p>ggplot2 allows you to do data manipulation, such as filtering or slicing, within the <code>data</code> argument. Avoid this, and instead do the data manipulation in a pipeline before starting plotting.</p>
 <div class="cell">
@@ -431,8 +433,6 @@ <h2 data-number="5.3" class="anchored" data-anchor-id="long-lines"><span class="
   });
   clipboard.on('success', onCopySuccess);
   if (window.document.getElementById('quarto-embedded-source-code-modal')) {
-    // For code content inside modals, clipBoardJS needs to be initialized with a container option
-    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
     const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
       text: getTextToCopy,
       container: window.document.getElementById('quarto-embedded-source-code-modal')
@@ -543,7 +543,6 @@ <h2 data-number="5.3" class="anchored" data-anchor-id="long-lines"><span class="
       if (window.Quarto?.typesetMath) {
         window.Quarto.typesetMath(note);
       }
-      // TODO in 1.5, we should make sure this works without a callout special case
       if (note.classList.contains("callout")) {
         return note.outerHTML;
       } else {

diff --git a/git.html b/git.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.57">
+<meta name="generator" content="quarto-1.6.39">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -36,10 +36,10 @@
 <script src="site_libs/quarto-html/tippy.umd.min.js"></script>
 <script src="site_libs/quarto-html/anchor.min.js"></script>
 <link href="site_libs/quarto-html/tippy.css" rel="stylesheet">
-<link href="site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" id="quarto-text-highlighting-styles">
+<link href="site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-5756323b8702476936633381e2142f88.min.css" rel="stylesheet" append-hash="true" id="quarto-bootstrap" data-mode="light">
 <script id="quarto-search-options" type="application/json">{
   "location": "sidebar",
   "copy-button": false,
@@ -351,8 +351,6 @@ <h2 data-number="11.2" class="anchored" data-anchor-id="pull-requests"><span cla
   });
   clipboard.on('success', onCopySuccess);
   if (window.document.getElementById('quarto-embedded-source-code-modal')) {
-    // For code content inside modals, clipBoardJS needs to be initialized with a container option
-    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
     const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
       text: getTextToCopy,
       container: window.document.getElementById('quarto-embedded-source-code-modal')
@@ -463,7 +461,6 @@ <h2 data-number="11.2" class="anchored" data-anchor-id="pull-requests"><span cla
       if (window.Quarto?.typesetMath) {
         window.Quarto.typesetMath(note);
       }
-      // TODO in 1.5, we should make sure this works without a callout special case
       if (note.classList.contains("callout")) {
         return note.outerHTML;
       } else {