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ome-ngff

Here are 5 public repositories matching this topic...

ome / ome2024-ngff-challenge

Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data

ome-ngff ome-zarr-converter

Updated Dec 23, 2024
Python

cellmap-segmentation-challenge

janelia-cellmap / cellmap-segmentation-challenge

Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post-processing on out-of-memory arrays, and evaluation of results against validation data.

machine-learning biology artificial-intelligence segmentation zarr ome-ngff

Updated Jan 24, 2025
Python

fractal-analytics-platform / ngio

NGIO is a Python library to streamline OME-Zarr image analysis workflows.

ome-zarr ome-ngff

Updated Jan 20, 2025
Python

Tpoquillon / Next-Generation-File-Format-Features

This repository is a proposal for addin generalistic feature specs in the context of the next generation bioimage analysis workflows hackathon 2023

feature-engineering ome-ngff

Updated Nov 9, 2023

ome / EMBO-Practical-Course-2023

Advanced methods in bioimage analysis

training cloud s3 posix ome-tiff ome zarr ngff ome-zarr ome-ngff

Updated Sep 10, 2023
Jupyter Notebook

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