v0.9.2

PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: tuneinsight
-Version: 0.9.0
+Version: 0.9.2
 Summary: Diapason is the official Python SDK for the Tune Insight API. Version 0.6.2 targets the API v0.8.0.
 License: Apache-2.0
 Author: Tune Insight SA
@@ -15,7 +15,6 @@ Requires-Dist: PyYAML (>=6.0,<7.0)
 Requires-Dist: attrs (>=21.3.0)
 Requires-Dist: black (==24.2.0)
 Requires-Dist: certifi (>=2023.7.22,<2024.0.0)
-Requires-Dist: handsdown (>=2.1.0,<3.0.0)
 Requires-Dist: httpx (>=0.15.4,<0.24.0)
 Requires-Dist: matplotlib (>=3.5.0,<4.0.0)
 Requires-Dist: notebook (>=6.4.11,<7.0.0)

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "tuneinsight"
-version = "0.9.0"
+version = "0.9.2"
 description = "Diapason is the official Python SDK for the Tune Insight API. Version 0.6.2 targets the API v0.8.0."
 authors = ["Tune Insight SA"]
 license = "Apache-2.0"
@@ -28,14 +28,14 @@ httpx = ">=0.15.4,<0.24.0"
 attrs = ">=21.3.0"
 certifi = "^2023.7.22"
 black = "24.2.0"
-handsdown = "^2.1.0"
 
 [tool.poetry.group.dev.dependencies]
 selenium = "^4.9.1"
 wheel = "^0.38.1"
 docker = "^6.0.1"
 pylint = "^2.13.2"
 pyvcf3 = "^1.0.3" # For GWAS .vcf file parsing
+pytest = "^8.1.1"
 
 [build-system]
 requires = ["poetry-core>=1.0.0"]

src/tuneinsight/api/api-checksum

@@ -1 +1 @@
-b71c951f2eb600cc2a1f073151c9a0c003bd48f1210262ab7df58c9d06e05aba
+1543c5968e0e568095cb5eeb44a3c7ab3179d6491f270932e268ab579c8d5948

src/tuneinsight/api/sdk/api/api_admin/get_settings.py

@@ -0,0 +1,154 @@
+from http import HTTPStatus
+from typing import Any, Dict, Optional, Union
+
+import httpx
+
+from ... import errors
+from ...client import Client
+from ...models.error import Error
+from ...models.settings import Settings
+from ...types import Response
+
+
+def _get_kwargs(
+    *,
+    client: Client,
+) -> Dict[str, Any]:
+    url = "{}/settings".format(client.base_url)
+
+    headers: Dict[str, str] = client.get_headers()
+    cookies: Dict[str, Any] = client.get_cookies()
+
+    return {
+        "method": "get",
+        "url": url,
+        "headers": headers,
+        "cookies": cookies,
+        "timeout": client.get_timeout(),
+    }
+
+
+def _parse_response(*, client: Client, response: httpx.Response) -> Optional[Union[Error, Settings]]:
+    if response.status_code == HTTPStatus.OK:
+        response_200 = Settings.from_dict(response.json())
+
+        return response_200
+    if response.status_code == HTTPStatus.BAD_REQUEST:
+        response_400 = Error.from_dict(response.json())
+
+        return response_400
+    if response.status_code == HTTPStatus.UNAUTHORIZED:
+        response_401 = Error.from_dict(response.json())
+
+        return response_401
+    if response.status_code == HTTPStatus.FORBIDDEN:
+        response_403 = Error.from_dict(response.json())
+
+        return response_403
+    if response.status_code == HTTPStatus.INTERNAL_SERVER_ERROR:
+        response_500 = Error.from_dict(response.json())
+
+        return response_500
+    if client.raise_on_unexpected_status:
+        raise errors.UnexpectedStatus(f"Unexpected status code: {response.status_code}")
+    else:
+        return None
+
+
+def _build_response(*, client: Client, response: httpx.Response) -> Response[Union[Error, Settings]]:
+    return Response(
+        status_code=HTTPStatus(response.status_code),
+        content=response.content,
+        headers=response.headers,
+        parsed=_parse_response(client=client, response=response),
+    )
+
+
+def sync_detailed(
+    *,
+    client: Client,
+) -> Response[Union[Error, Settings]]:
+    """retrieve the instance settings
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    kwargs = _get_kwargs(
+        client=client,
+    )
+
+    response = httpx.request(
+        verify=client.verify_ssl,
+        **kwargs,
+    )
+
+    return _build_response(client=client, response=response)
+
+
+def sync(
+    *,
+    client: Client,
+) -> Optional[Union[Error, Settings]]:
+    """retrieve the instance settings
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    return sync_detailed(
+        client=client,
+    ).parsed
+
+
+async def asyncio_detailed(
+    *,
+    client: Client,
+) -> Response[Union[Error, Settings]]:
+    """retrieve the instance settings
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    kwargs = _get_kwargs(
+        client=client,
+    )
+
+    async with httpx.AsyncClient(verify=client.verify_ssl) as _client:
+        response = await _client.request(**kwargs)
+
+    return _build_response(client=client, response=response)
+
+
+async def asyncio(
+    *,
+    client: Client,
+) -> Optional[Union[Error, Settings]]:
+    """retrieve the instance settings
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    return (
+        await asyncio_detailed(
+            client=client,
+        )
+    ).parsed

src/tuneinsight/api/sdk/api/api_admin/patch_settings.py

@@ -0,0 +1,182 @@
+from http import HTTPStatus
+from typing import Any, Dict, Optional, Union
+
+import httpx
+
+from ... import errors
+from ...client import Client
+from ...models.error import Error
+from ...models.settings import Settings
+from ...types import Response
+
+
+def _get_kwargs(
+    *,
+    client: Client,
+    json_body: Settings,
+) -> Dict[str, Any]:
+    url = "{}/settings".format(client.base_url)
+
+    headers: Dict[str, str] = client.get_headers()
+    cookies: Dict[str, Any] = client.get_cookies()
+
+    json_json_body = json_body.to_dict()
+
+    return {
+        "method": "patch",
+        "url": url,
+        "headers": headers,
+        "cookies": cookies,
+        "timeout": client.get_timeout(),
+        "json": json_json_body,
+    }
+
+
+def _parse_response(*, client: Client, response: httpx.Response) -> Optional[Union[Error, Settings]]:
+    if response.status_code == HTTPStatus.OK:
+        response_200 = Settings.from_dict(response.json())
+
+        return response_200
+    if response.status_code == HTTPStatus.BAD_REQUEST:
+        response_400 = Error.from_dict(response.json())
+
+        return response_400
+    if response.status_code == HTTPStatus.UNAUTHORIZED:
+        response_401 = Error.from_dict(response.json())
+
+        return response_401
+    if response.status_code == HTTPStatus.FORBIDDEN:
+        response_403 = Error.from_dict(response.json())
+
+        return response_403
+    if response.status_code == HTTPStatus.UNPROCESSABLE_ENTITY:
+        response_422 = Error.from_dict(response.json())
+
+        return response_422
+    if response.status_code == HTTPStatus.INTERNAL_SERVER_ERROR:
+        response_500 = Error.from_dict(response.json())
+
+        return response_500
+    if client.raise_on_unexpected_status:
+        raise errors.UnexpectedStatus(f"Unexpected status code: {response.status_code}")
+    else:
+        return None
+
+
+def _build_response(*, client: Client, response: httpx.Response) -> Response[Union[Error, Settings]]:
+    return Response(
+        status_code=HTTPStatus(response.status_code),
+        content=response.content,
+        headers=response.headers,
+        parsed=_parse_response(client=client, response=response),
+    )
+
+
+def sync_detailed(
+    *,
+    client: Client,
+    json_body: Settings,
+) -> Response[Union[Error, Settings]]:
+    """modify the settings
+
+    Args:
+        json_body (Settings): instance settings that is configurable by the administrator.
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    kwargs = _get_kwargs(
+        client=client,
+        json_body=json_body,
+    )
+
+    response = httpx.request(
+        verify=client.verify_ssl,
+        **kwargs,
+    )
+
+    return _build_response(client=client, response=response)
+
+
+def sync(
+    *,
+    client: Client,
+    json_body: Settings,
+) -> Optional[Union[Error, Settings]]:
+    """modify the settings
+
+    Args:
+        json_body (Settings): instance settings that is configurable by the administrator.
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    return sync_detailed(
+        client=client,
+        json_body=json_body,
+    ).parsed
+
+
+async def asyncio_detailed(
+    *,
+    client: Client,
+    json_body: Settings,
+) -> Response[Union[Error, Settings]]:
+    """modify the settings
+
+    Args:
+        json_body (Settings): instance settings that is configurable by the administrator.
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    kwargs = _get_kwargs(
+        client=client,
+        json_body=json_body,
+    )
+
+    async with httpx.AsyncClient(verify=client.verify_ssl) as _client:
+        response = await _client.request(**kwargs)
+
+    return _build_response(client=client, response=response)
+
+
+async def asyncio(
+    *,
+    client: Client,
+    json_body: Settings,
+) -> Optional[Union[Error, Settings]]:
+    """modify the settings
+
+    Args:
+        json_body (Settings): instance settings that is configurable by the administrator.
+
+    Raises:
+        errors.UnexpectedStatus: If the server returns an undocumented status code and Client.raise_on_unexpected_status is True.
+        httpx.TimeoutException: If the request takes longer than Client.timeout.
+
+    Returns:
+        Response[Union[Error, Settings]]
+    """
+
+    return (
+        await asyncio_detailed(
+            client=client,
+            json_body=json_body,
+        )
+    ).parsed