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fix typo in fn name
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tedil committed Jan 24, 2025
1 parent 096c922 commit fa2cbeb
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Showing 2 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions src/annotate/seqvars/mod.rs
Original file line number Diff line number Diff line change
Expand Up @@ -2071,7 +2071,7 @@ pub(crate) fn setup_seqvars_annotator(

// Add the ClinVar annotator if requested.
if let Some(rocksdb_paths) = &sources.clinvar {
let clinvar_dbs = intialize_clinvar_annotators_for_assembly(rocksdb_paths, assembly)?;
let clinvar_dbs = initialize_clinvar_annotators_for_assembly(rocksdb_paths, assembly)?;
for clinvar_db in clinvar_dbs {
annotators.push(AnnotatorEnum::Clinvar(clinvar_db))
}
Expand Down Expand Up @@ -2102,7 +2102,7 @@ pub(crate) fn setup_seqvars_annotator(
Ok(annotator)
}

pub(crate) fn intialize_clinvar_annotators_for_assembly(
pub(crate) fn initialize_clinvar_annotators_for_assembly(
rocksdb_paths: &[String],
assembly: Option<Assembly>,
) -> Result<Vec<ClinvarAnnotator>, Error> {
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4 changes: 2 additions & 2 deletions src/server/run/mod.rs
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
use crate::annotate::cli::{Sources, TranscriptSettings};
use crate::annotate::seqvars::csq::ConfigBuilder;
use crate::annotate::seqvars::{
initialize_frequency_annotators_for_assembly, intialize_clinvar_annotators_for_assembly,
initialize_clinvar_annotators_for_assembly, initialize_frequency_annotators_for_assembly,
load_transcript_dbs_for_assembly, ConsequenceAnnotator,
};
use crate::db::merge::merge_transcript_databases;
Expand Down Expand Up @@ -301,7 +301,7 @@ pub async fn run(args_common: &crate::common::Args, args: &Args) -> Result<(), a
}

if let Some(paths) = args.sources.clinvar.as_ref() {
let annotators = intialize_clinvar_annotators_for_assembly(paths, Some(assembly))?;
let annotators = initialize_clinvar_annotators_for_assembly(paths, Some(assembly))?;

match annotators.len() {
0 => tracing::warn!(
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