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mvfki authored Dec 10, 2023
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Expand Up @@ -9,6 +9,12 @@ RNA velocity can be added as another layer of information.

For R users, we have an R package [CytoSimplex](https://github.com/welch-lab/CytoSimplex) that provides the same functionalities.

CytoSimplex can be installed with the shell/command-line command:

```bash
pip install cytosimplex
```

We have build a [documentation website](https://pycytosimplex.readthedocs.io/en/latest/index.html) for:
- [Detailed instruction for installation](https://pycytosimplex.readthedocs.io/en/latest/installation.html)
- [Walkthrough example from loading data to creating different simplex visualization](https://pycytosimplex.readthedocs.io/en/latest/example/index.html)

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