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AlexsLemonade / rOpenScPCA Public

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Handle large matrices and change default Seurat format#21

Merged

jashapiro merged 5 commits intomainAlexsLemonade/rOpenScPCA:mainfrom jashapiro/largematrixAlexsLemonade/rOpenScPCA:jashapiro/largematrixCopy head branch name to clipboard

Dec 18, 2024

+149-57

Conversation Commits5 (5)Checks Files changed

Commits

Commits on Dec 17, 2024

Break up large matrices for sums
jashapiro
committed
sort after sparse, larger chunk size
jashapiro
committed
Change default assay type to v5, keeping with Seurat::CreateSeuratObject()
jashapiro
committed
Change default to v5
jashapiro
committed

Commits on Dec 18, 2024

Add cell chunk size option and test splitting cell types
jashapiro
committed

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