Remove redudant singleR install step

CCRSF-IFX · May 1, 2024 · 4098e1c · 4098e1c
1 parent f131365
commit 4098e1c
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/dockerhub_repos/sc-smk-wl/vr1.0.0/Dockerfile b/dockerhub_repos/sc-smk-wl/vr1.0.0/Dockerfile
@@ -12,7 +12,6 @@ RUN R -e 'install.packages("pkgbuild")'
 RUN R -e 'devtools::install_version("dplyr", version = "1.1.4", repos = "https://cran.rstudio.com/",upgrade = "never", force = TRUE)' 
 RUN R -e 'devtools::install_version("Seurat", version = "5.0.1", repos = "https://cran.rstudio.com/",upgrade = "never", force = TRUE)' 
 RUN R -e 'devtools::install_version("clusterProfiler", version="4.10.1", repos=c("https://bioconductor.org/packages/3.18/bioc","http://cran.us.r-project.org"),upgrade = "never", force = TRUE)' 
-RUN R -e 'devtools::install_version("SingleR", version="2.4.1", repos=c("https://bioconductor.org/packages/3.18/bioc","http://cran.us.r-project.org"),upgrade = "never", force = TRUE)'
 RUN R -e 'devtools::install_version("celda", version="1.18.2", repos=c("https://bioconductor.org/packages/3.18/bioc", "https://bioconductor.org/packages/devel/bioc","http://cran.us.r-project.org"),upgrade = "never", force = TRUE)'
 RUN R -e 'devtools::install_version("GSVA", version="1.50.2", repos=c("https://bioconductor.org/packages/3.18/bioc","http://cran.us.r-project.org"),upgrade = "never", force = TRUE)'
 RUN R -e 'devtools::install_version("org.Hs.eg.db", version="3.18.0", repos="https://bioconductor.org/packages/3.18/data/annotation", upgrade = "never", force = TRUE)'